Protein–RNA interactions for Protein: Q9H7F0

ATP13A3, Probable cation-transporting ATPase 13A3, humanhuman

Predictions only

Length 1,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3Q9H7F0 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP13A3Q9H7F0 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP13A3Q9H7F0 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
ATP13A3Q9H7F0 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.05■□□□□ 0.8
ATP13A3Q9H7F0 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATP13A3Q9H7F0 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP13A3Q9H7F0 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATP13A3Q9H7F0 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
ATP13A3Q9H7F0 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP13A3Q9H7F0 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP13A3Q9H7F0 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATP13A3Q9H7F0 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATP13A3Q9H7F0 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATP13A3Q9H7F0 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATP13A3Q9H7F0 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATP13A3Q9H7F0 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.05■□□□□ 0.8
ATP13A3Q9H7F0 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.05■□□□□ 0.8
ATP13A3Q9H7F0 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.05■□□□□ 0.8
ATP13A3Q9H7F0 PRKY-204ENST00000533551 1019 ntBASIC20.05■□□□□ 0.8
ATP13A3Q9H7F0 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATP13A3Q9H7F0 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.05■□□□□ 0.8
ATP13A3Q9H7F0 MTDHP1-201ENST00000605323 784 ntBASIC20.05■□□□□ 0.8
ATP13A3Q9H7F0 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP13A3Q9H7F0 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.05■□□□□ 0.8
ATP13A3Q9H7F0 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATP13A3Q9H7F0 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP13A3Q9H7F0 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP13A3Q9H7F0 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.04■□□□□ 0.8
ATP13A3Q9H7F0 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP13A3Q9H7F0 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.04■□□□□ 0.8
ATP13A3Q9H7F0 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ATP13A3Q9H7F0 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ATP13A3Q9H7F0 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.04■□□□□ 0.8
ATP13A3Q9H7F0 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP13A3Q9H7F0 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP13A3Q9H7F0 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
ATP13A3Q9H7F0 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
ATP13A3Q9H7F0 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ATP13A3Q9H7F0 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP13A3Q9H7F0 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP13A3Q9H7F0 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP13A3Q9H7F0 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
ATP13A3Q9H7F0 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP13A3Q9H7F0 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.04■□□□□ 0.8
ATP13A3Q9H7F0 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ATP13A3Q9H7F0 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP13A3Q9H7F0 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP13A3Q9H7F0 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
ATP13A3Q9H7F0 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.03■□□□□ 0.8
ATP13A3Q9H7F0 PHGDH-210ENST00000641115 1638 ntBASIC20.03■□□□□ 0.8
ATP13A3Q9H7F0 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP13A3Q9H7F0 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP13A3Q9H7F0 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.03■□□□□ 0.8
ATP13A3Q9H7F0 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.03■□□□□ 0.8
ATP13A3Q9H7F0 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP13A3Q9H7F0 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.03■□□□□ 0.8
ATP13A3Q9H7F0 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP13A3Q9H7F0 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
ATP13A3Q9H7F0 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.03■□□□□ 0.8
ATP13A3Q9H7F0 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP13A3Q9H7F0 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP13A3Q9H7F0 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.02■□□□□ 0.8
ATP13A3Q9H7F0 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP13A3Q9H7F0 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP13A3Q9H7F0 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP13A3Q9H7F0 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP13A3Q9H7F0 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP13A3Q9H7F0 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.02■□□□□ 0.8
ATP13A3Q9H7F0 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.02■□□□□ 0.8
ATP13A3Q9H7F0 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP13A3Q9H7F0 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP13A3Q9H7F0 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
ATP13A3Q9H7F0 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP13A3Q9H7F0 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP13A3Q9H7F0 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP13A3Q9H7F0 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP13A3Q9H7F0 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.02■□□□□ 0.8
ATP13A3Q9H7F0 AC098590.1-201ENST00000468126 897 ntBASIC20.02■□□□□ 0.8
ATP13A3Q9H7F0 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.02■□□□□ 0.8
ATP13A3Q9H7F0 C1QBPP2-201ENST00000528754 825 ntBASIC20.02■□□□□ 0.8
ATP13A3Q9H7F0 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
ATP13A3Q9H7F0 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.02■□□□□ 0.8
ATP13A3Q9H7F0 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.02■□□□□ 0.8
ATP13A3Q9H7F0 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP13A3Q9H7F0 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP13A3Q9H7F0 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP13A3Q9H7F0 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.02■□□□□ 0.8
ATP13A3Q9H7F0 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.02■□□□□ 0.79
ATP13A3Q9H7F0 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
ATP13A3Q9H7F0 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
ATP13A3Q9H7F0 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.01■□□□□ 0.79
ATP13A3Q9H7F0 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ATP13A3Q9H7F0 AC116351.2-201ENST00000606540 1585 ntBASIC20.01■□□□□ 0.79
ATP13A3Q9H7F0 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
ATP13A3Q9H7F0 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATP13A3Q9H7F0 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATP13A3Q9H7F0 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATP13A3Q9H7F0 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
ATP13A3Q9H7F0 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.01■□□□□ 0.79
ATP13A3Q9H7F0 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms