Protein–RNA interactions for Protein: Q9H2H9

SLC38A1, Sodium-coupled neutral amino acid transporter 1, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1Q9H2H9 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC38A1Q9H2H9 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SLC38A1Q9H2H9 BX276092.2-201ENST00000417668 665 ntBASIC18.38■□□□□ 0.53
SLC38A1Q9H2H9 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.38■□□□□ 0.53
SLC38A1Q9H2H9 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.38■□□□□ 0.53
SLC38A1Q9H2H9 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.38■□□□□ 0.53
SLC38A1Q9H2H9 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SLC38A1Q9H2H9 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SLC38A1Q9H2H9 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC38A1Q9H2H9 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC38A1Q9H2H9 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC38A1Q9H2H9 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC38A1Q9H2H9 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC38A1Q9H2H9 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC38A1Q9H2H9 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.38■□□□□ 0.53
SLC38A1Q9H2H9 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC38A1Q9H2H9 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SLC38A1Q9H2H9 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.38■□□□□ 0.53
SLC38A1Q9H2H9 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SLC38A1Q9H2H9 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.38■□□□□ 0.53
SLC38A1Q9H2H9 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC38A1Q9H2H9 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC38A1Q9H2H9 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC38A1Q9H2H9 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC38A1Q9H2H9 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC38A1Q9H2H9 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC38A1Q9H2H9 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.37■□□□□ 0.53
SLC38A1Q9H2H9 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SLC38A1Q9H2H9 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.37■□□□□ 0.53
SLC38A1Q9H2H9 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.37■□□□□ 0.53
SLC38A1Q9H2H9 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SLC38A1Q9H2H9 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.37■□□□□ 0.53
SLC38A1Q9H2H9 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC38A1Q9H2H9 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SLC38A1Q9H2H9 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
SLC38A1Q9H2H9 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.37■□□□□ 0.53
SLC38A1Q9H2H9 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC38A1Q9H2H9 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
SLC38A1Q9H2H9 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC38A1Q9H2H9 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC38A1Q9H2H9 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC38A1Q9H2H9 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC38A1Q9H2H9 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC38A1Q9H2H9 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC38A1Q9H2H9 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC38A1Q9H2H9 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC38A1Q9H2H9 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.36■□□□□ 0.53
SLC38A1Q9H2H9 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC38A1Q9H2H9 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC38A1Q9H2H9 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC38A1Q9H2H9 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC38A1Q9H2H9 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC38A1Q9H2H9 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC38A1Q9H2H9 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.36■□□□□ 0.53
SLC38A1Q9H2H9 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SLC38A1Q9H2H9 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SLC38A1Q9H2H9 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC38A1Q9H2H9 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.36■□□□□ 0.53
SLC38A1Q9H2H9 PHGDH-210ENST00000641115 1638 ntBASIC18.36■□□□□ 0.53
SLC38A1Q9H2H9 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC38A1Q9H2H9 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC38A1Q9H2H9 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SLC38A1Q9H2H9 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC38A1Q9H2H9 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC38A1Q9H2H9 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC38A1Q9H2H9 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC38A1Q9H2H9 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC38A1Q9H2H9 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC38A1Q9H2H9 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC38A1Q9H2H9 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC38A1Q9H2H9 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC38A1Q9H2H9 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC38A1Q9H2H9 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC38A1Q9H2H9 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC38A1Q9H2H9 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC38A1Q9H2H9 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SLC38A1Q9H2H9 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC38A1Q9H2H9 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC38A1Q9H2H9 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC38A1Q9H2H9 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.35■□□□□ 0.53
SLC38A1Q9H2H9 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC38A1Q9H2H9 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.35■□□□□ 0.53
SLC38A1Q9H2H9 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC38A1Q9H2H9 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SLC38A1Q9H2H9 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC38A1Q9H2H9 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.35■□□□□ 0.53
SLC38A1Q9H2H9 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.35■□□□□ 0.53
SLC38A1Q9H2H9 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SLC38A1Q9H2H9 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC38A1Q9H2H9 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SLC38A1Q9H2H9 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.35■□□□□ 0.53
SLC38A1Q9H2H9 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.35■□□□□ 0.53
SLC38A1Q9H2H9 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC38A1Q9H2H9 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC38A1Q9H2H9 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC38A1Q9H2H9 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC38A1Q9H2H9 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC38A1Q9H2H9 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.34■□□□□ 0.53
SLC38A1Q9H2H9 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.34■□□□□ 0.53
SLC38A1Q9H2H9 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms