Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNTNAP3Q9BZ76 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNTNAP3Q9BZ76 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CNTNAP3Q9BZ76 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNTNAP3Q9BZ76 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNTNAP3Q9BZ76 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
CNTNAP3Q9BZ76 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CNTNAP3Q9BZ76 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.93■□□□□ 0.62
CNTNAP3Q9BZ76 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CNTNAP3Q9BZ76 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CNTNAP3Q9BZ76 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CNTNAP3Q9BZ76 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CNTNAP3Q9BZ76 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CNTNAP3Q9BZ76 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
CNTNAP3Q9BZ76 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CNTNAP3Q9BZ76 MIR1233-2-201ENST00000408138 82 ntBASIC18.93■□□□□ 0.62
CNTNAP3Q9BZ76 MIR1233-1-201ENST00000408722 82 ntBASIC18.93■□□□□ 0.62
CNTNAP3Q9BZ76 AC004951.3-201ENST00000418645 1148 ntBASIC18.93■□□□□ 0.62
CNTNAP3Q9BZ76 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CNTNAP3Q9BZ76 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CNTNAP3Q9BZ76 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.93■□□□□ 0.62
CNTNAP3Q9BZ76 DGCR10-201ENST00000609839 495 ntBASIC18.93■□□□□ 0.62
CNTNAP3Q9BZ76 NPAP1P7-201ENST00000613027 823 ntBASIC18.93■□□□□ 0.62
CNTNAP3Q9BZ76 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.93■□□□□ 0.62
CNTNAP3Q9BZ76 AL031432.5-201ENST00000641059 760 ntBASIC18.93■□□□□ 0.62
CNTNAP3Q9BZ76 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CNTNAP3Q9BZ76 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CNTNAP3Q9BZ76 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CNTNAP3Q9BZ76 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CNTNAP3Q9BZ76 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CNTNAP3Q9BZ76 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CNTNAP3Q9BZ76 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CNTNAP3Q9BZ76 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CNTNAP3Q9BZ76 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CNTNAP3Q9BZ76 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.92■□□□□ 0.62
CNTNAP3Q9BZ76 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CNTNAP3Q9BZ76 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CNTNAP3Q9BZ76 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CNTNAP3Q9BZ76 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.92■□□□□ 0.62
CNTNAP3Q9BZ76 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CNTNAP3Q9BZ76 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.92■□□□□ 0.62
CNTNAP3Q9BZ76 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.92■□□□□ 0.62
CNTNAP3Q9BZ76 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.92■□□□□ 0.62
CNTNAP3Q9BZ76 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CNTNAP3Q9BZ76 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.92■□□□□ 0.62
CNTNAP3Q9BZ76 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CNTNAP3Q9BZ76 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.92■□□□□ 0.62
CNTNAP3Q9BZ76 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CNTNAP3Q9BZ76 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CNTNAP3Q9BZ76 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CNTNAP3Q9BZ76 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNTNAP3Q9BZ76 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNTNAP3Q9BZ76 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNTNAP3Q9BZ76 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CNTNAP3Q9BZ76 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNTNAP3Q9BZ76 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNTNAP3Q9BZ76 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNTNAP3Q9BZ76 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.91■□□□□ 0.62
CNTNAP3Q9BZ76 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CNTNAP3Q9BZ76 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.91■□□□□ 0.62
CNTNAP3Q9BZ76 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.91■□□□□ 0.62
CNTNAP3Q9BZ76 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CNTNAP3Q9BZ76 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CNTNAP3Q9BZ76 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.91■□□□□ 0.62
CNTNAP3Q9BZ76 AC104692.2-201ENST00000603054 253 ntBASIC18.91■□□□□ 0.62
CNTNAP3Q9BZ76 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNTNAP3Q9BZ76 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.91■□□□□ 0.62
CNTNAP3Q9BZ76 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CNTNAP3Q9BZ76 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.91■□□□□ 0.62
CNTNAP3Q9BZ76 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNTNAP3Q9BZ76 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNTNAP3Q9BZ76 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNTNAP3Q9BZ76 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
CNTNAP3Q9BZ76 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNTNAP3Q9BZ76 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CNTNAP3Q9BZ76 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNTNAP3Q9BZ76 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNTNAP3Q9BZ76 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CNTNAP3Q9BZ76 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CNTNAP3Q9BZ76 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNTNAP3Q9BZ76 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNTNAP3Q9BZ76 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNTNAP3Q9BZ76 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNTNAP3Q9BZ76 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNTNAP3Q9BZ76 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.9■□□□□ 0.62
CNTNAP3Q9BZ76 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.9■□□□□ 0.62
CNTNAP3Q9BZ76 EMBP1-201ENST00000458200 901 ntBASIC18.9■□□□□ 0.62
CNTNAP3Q9BZ76 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
CNTNAP3Q9BZ76 AL160237.2-201ENST00000556165 472 ntBASIC18.9■□□□□ 0.62
CNTNAP3Q9BZ76 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.9■□□□□ 0.62
CNTNAP3Q9BZ76 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.9■□□□□ 0.62
CNTNAP3Q9BZ76 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.9■□□□□ 0.62
CNTNAP3Q9BZ76 AC116562.4-202ENST00000641738 218 ntBASIC18.9■□□□□ 0.62
CNTNAP3Q9BZ76 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.9■□□□□ 0.62
CNTNAP3Q9BZ76 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CNTNAP3Q9BZ76 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNTNAP3Q9BZ76 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CNTNAP3Q9BZ76 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.9■□□□□ 0.62
CNTNAP3Q9BZ76 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CNTNAP3Q9BZ76 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms