Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
FOXC2Q99958 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
FOXC2Q99958 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC16.74■□□□□ 0.27
FOXC2Q99958 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
FOXC2Q99958 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
FOXC2Q99958 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.74■□□□□ 0.27
FOXC2Q99958 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
FOXC2Q99958 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.74■□□□□ 0.27
FOXC2Q99958 HLA-G-202ENST00000376815 851 ntBASIC16.74■□□□□ 0.27
FOXC2Q99958 HLA-G-203ENST00000376818 1127 ntBASIC16.74■□□□□ 0.27
FOXC2Q99958 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.74■□□□□ 0.27
FOXC2Q99958 YBX1P2-201ENST00000489612 999 ntBASIC16.74■□□□□ 0.27
FOXC2Q99958 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
FOXC2Q99958 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.74■□□□□ 0.27
FOXC2Q99958 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.74■□□□□ 0.27
FOXC2Q99958 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.74■□□□□ 0.27
FOXC2Q99958 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
FOXC2Q99958 AL691432.3-201ENST00000621860 400 ntBASIC16.74■□□□□ 0.27
FOXC2Q99958 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
FOXC2Q99958 IER3-202ENST00000376377 1350 ntBASIC16.74■□□□□ 0.27
FOXC2Q99958 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
FOXC2Q99958 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
FOXC2Q99958 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC16.73■□□□□ 0.27
FOXC2Q99958 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
FOXC2Q99958 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
FOXC2Q99958 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
FOXC2Q99958 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
FOXC2Q99958 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.73■□□□□ 0.27
FOXC2Q99958 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
FOXC2Q99958 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
FOXC2Q99958 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
FOXC2Q99958 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
FOXC2Q99958 COX11P1-201ENST00000489116 835 ntBASIC16.73■□□□□ 0.27
FOXC2Q99958 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.73■□□□□ 0.27
FOXC2Q99958 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.73■□□□□ 0.27
FOXC2Q99958 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.73■□□□□ 0.27
FOXC2Q99958 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC16.73■□□□□ 0.27
FOXC2Q99958 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.73■□□□□ 0.27
FOXC2Q99958 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.73■□□□□ 0.27
FOXC2Q99958 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.73■□□□□ 0.27
FOXC2Q99958 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
FOXC2Q99958 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
FOXC2Q99958 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
FOXC2Q99958 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
FOXC2Q99958 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC16.73■□□□□ 0.27
FOXC2Q99958 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
FOXC2Q99958 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
FOXC2Q99958 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
FOXC2Q99958 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
FOXC2Q99958 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
FOXC2Q99958 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
FOXC2Q99958 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16.72■□□□□ 0.27
FOXC2Q99958 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
FOXC2Q99958 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
FOXC2Q99958 FAM86EP-206ENST00000510506 987 ntBASIC16.72■□□□□ 0.27
FOXC2Q99958 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.72■□□□□ 0.27
FOXC2Q99958 C1QL1P1-201ENST00000568105 661 ntBASIC16.72■□□□□ 0.27
FOXC2Q99958 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.72■□□□□ 0.27
FOXC2Q99958 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.72■□□□□ 0.27
FOXC2Q99958 AC116562.4-202ENST00000641738 218 ntBASIC16.72■□□□□ 0.27
FOXC2Q99958 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
FOXC2Q99958 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
FOXC2Q99958 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
FOXC2Q99958 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
FOXC2Q99958 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
FOXC2Q99958 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
FOXC2Q99958 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
FOXC2Q99958 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
FOXC2Q99958 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC16.72■□□□□ 0.27
FOXC2Q99958 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
FOXC2Q99958 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
FOXC2Q99958 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
FOXC2Q99958 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC16.71■□□□□ 0.27
FOXC2Q99958 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
FOXC2Q99958 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
FOXC2Q99958 INGX-201ENST00000359239 846 ntBASIC16.71■□□□□ 0.27
FOXC2Q99958 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.71■□□□□ 0.27
FOXC2Q99958 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.71■□□□□ 0.27
FOXC2Q99958 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.71■□□□□ 0.27
FOXC2Q99958 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
FOXC2Q99958 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.71■□□□□ 0.27
FOXC2Q99958 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.71■□□□□ 0.27
FOXC2Q99958 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
FOXC2Q99958 AC127496.7-201ENST00000625110 1798 ntBASIC16.71■□□□□ 0.27
FOXC2Q99958 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
FOXC2Q99958 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXC2Q99958 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
FOXC2Q99958 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXC2Q99958 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXC2Q99958 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
FOXC2Q99958 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
FOXC2Q99958 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
FOXC2Q99958 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXC2Q99958 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
FOXC2Q99958 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
FOXC2Q99958 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
FOXC2Q99958 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC16.7■□□□□ 0.26
FOXC2Q99958 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXC2Q99958 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.7■□□□□ 0.26
FOXC2Q99958 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms