Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NPAS2Q99743 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NPAS2Q99743 AC245052.3-201ENST00000450182 901 ntBASIC19.37■□□□□ 0.69
NPAS2Q99743 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.37■□□□□ 0.69
NPAS2Q99743 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
NPAS2Q99743 AL138781.1-201ENST00000566567 1274 ntBASIC19.37■□□□□ 0.69
NPAS2Q99743 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.37■□□□□ 0.69
NPAS2Q99743 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NPAS2Q99743 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NPAS2Q99743 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NPAS2Q99743 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NPAS2Q99743 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
NPAS2Q99743 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
NPAS2Q99743 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NPAS2Q99743 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.37■□□□□ 0.69
NPAS2Q99743 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
NPAS2Q99743 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.37■□□□□ 0.69
NPAS2Q99743 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NPAS2Q99743 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NPAS2Q99743 TMEM179-206ENST00000616017 1645 ntBASIC19.36■□□□□ 0.69
NPAS2Q99743 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NPAS2Q99743 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NPAS2Q99743 AC093484.2-201ENST00000580996 2166 ntBASIC19.36■□□□□ 0.69
NPAS2Q99743 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.36■□□□□ 0.69
NPAS2Q99743 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NPAS2Q99743 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NPAS2Q99743 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.36■□□□□ 0.69
NPAS2Q99743 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NPAS2Q99743 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
NPAS2Q99743 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NPAS2Q99743 AF201337.1-201ENST00000520239 748 ntBASIC19.36■□□□□ 0.69
NPAS2Q99743 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.36■□□□□ 0.69
NPAS2Q99743 AC105036.2-201ENST00000569468 176 ntBASIC19.36■□□□□ 0.69
NPAS2Q99743 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.36■□□□□ 0.69
NPAS2Q99743 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.36■□□□□ 0.69
NPAS2Q99743 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.36■□□□□ 0.69
NPAS2Q99743 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NPAS2Q99743 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NPAS2Q99743 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NPAS2Q99743 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.36■□□□□ 0.69
NPAS2Q99743 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPAS2Q99743 AC116050.2-201ENST00000612102 1779 ntBASIC19.35■□□□□ 0.69
NPAS2Q99743 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPAS2Q99743 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPAS2Q99743 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NPAS2Q99743 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
NPAS2Q99743 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.35■□□□□ 0.69
NPAS2Q99743 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.35■□□□□ 0.69
NPAS2Q99743 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.35■□□□□ 0.69
NPAS2Q99743 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.35■□□□□ 0.69
NPAS2Q99743 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPAS2Q99743 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NPAS2Q99743 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.35■□□□□ 0.69
NPAS2Q99743 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPAS2Q99743 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NPAS2Q99743 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NPAS2Q99743 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
NPAS2Q99743 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPAS2Q99743 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPAS2Q99743 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPAS2Q99743 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NPAS2Q99743 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.34■□□□□ 0.69
NPAS2Q99743 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPAS2Q99743 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPAS2Q99743 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.34■□□□□ 0.69
NPAS2Q99743 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPAS2Q99743 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.34■□□□□ 0.69
NPAS2Q99743 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.34■□□□□ 0.69
NPAS2Q99743 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.34■□□□□ 0.69
NPAS2Q99743 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
NPAS2Q99743 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
NPAS2Q99743 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.34■□□□□ 0.69
NPAS2Q99743 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
NPAS2Q99743 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.34■□□□□ 0.69
NPAS2Q99743 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NPAS2Q99743 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPAS2Q99743 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPAS2Q99743 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
NPAS2Q99743 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
NPAS2Q99743 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPAS2Q99743 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPAS2Q99743 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NPAS2Q99743 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
NPAS2Q99743 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.33■□□□□ 0.69
NPAS2Q99743 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.33■□□□□ 0.69
NPAS2Q99743 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NPAS2Q99743 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
NPAS2Q99743 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NPAS2Q99743 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
NPAS2Q99743 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
NPAS2Q99743 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
NPAS2Q99743 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
NPAS2Q99743 AC093787.1-201ENST00000450396 207 ntBASIC19.33■□□□□ 0.68
NPAS2Q99743 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.33■□□□□ 0.68
NPAS2Q99743 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.33■□□□□ 0.68
NPAS2Q99743 AC243732.1-201ENST00000612648 864 ntBASIC19.33■□□□□ 0.68
NPAS2Q99743 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.33■□□□□ 0.68
NPAS2Q99743 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.33■□□□□ 0.68
NPAS2Q99743 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.33■□□□□ 0.68
NPAS2Q99743 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms