Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.2■□□□□ 0.5
TIMP4Q99727 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.2■□□□□ 0.5
TIMP4Q99727 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TIMP4Q99727 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TIMP4Q99727 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TIMP4Q99727 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TIMP4Q99727 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TIMP4Q99727 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TIMP4Q99727 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
TIMP4Q99727 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TIMP4Q99727 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TIMP4Q99727 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
TIMP4Q99727 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TIMP4Q99727 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TIMP4Q99727 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TIMP4Q99727 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
TIMP4Q99727 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TIMP4Q99727 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TIMP4Q99727 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TIMP4Q99727 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TIMP4Q99727 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TIMP4Q99727 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.19■□□□□ 0.5
TIMP4Q99727 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
TIMP4Q99727 POM121L13P-201ENST00000422362 380 ntBASIC18.19■□□□□ 0.5
TIMP4Q99727 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TIMP4Q99727 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
TIMP4Q99727 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.19■□□□□ 0.5
TIMP4Q99727 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TIMP4Q99727 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.19■□□□□ 0.5
TIMP4Q99727 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.19■□□□□ 0.5
TIMP4Q99727 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TIMP4Q99727 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.19■□□□□ 0.5
TIMP4Q99727 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.19■□□□□ 0.5
TIMP4Q99727 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TIMP4Q99727 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TIMP4Q99727 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.19■□□□□ 0.5
TIMP4Q99727 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TIMP4Q99727 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.19■□□□□ 0.5
TIMP4Q99727 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
TIMP4Q99727 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.19■□□□□ 0.5
TIMP4Q99727 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TIMP4Q99727 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TIMP4Q99727 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
TIMP4Q99727 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TIMP4Q99727 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TIMP4Q99727 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TIMP4Q99727 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
TIMP4Q99727 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TIMP4Q99727 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.18■□□□□ 0.5
TIMP4Q99727 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.18■□□□□ 0.5
TIMP4Q99727 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TIMP4Q99727 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TIMP4Q99727 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.18■□□□□ 0.5
TIMP4Q99727 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.18■□□□□ 0.5
TIMP4Q99727 AL390719.1-204ENST00000412397 1219 ntBASIC18.18■□□□□ 0.5
TIMP4Q99727 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
TIMP4Q99727 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.18■□□□□ 0.5
TIMP4Q99727 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.18■□□□□ 0.5
TIMP4Q99727 AC006557.6-201ENST00000623071 864 ntBASIC18.18■□□□□ 0.5
TIMP4Q99727 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TIMP4Q99727 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.18■□□□□ 0.5
TIMP4Q99727 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.18■□□□□ 0.5
TIMP4Q99727 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.18■□□□□ 0.5
TIMP4Q99727 SMG8-203ENST00000578922 2178 ntBASIC18.18■□□□□ 0.5
TIMP4Q99727 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TIMP4Q99727 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.18■□□□□ 0.5
TIMP4Q99727 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TIMP4Q99727 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TIMP4Q99727 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TIMP4Q99727 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TIMP4Q99727 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.18■□□□□ 0.5
TIMP4Q99727 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TIMP4Q99727 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.18■□□□□ 0.5
TIMP4Q99727 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TIMP4Q99727 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.18■□□□□ 0.5
TIMP4Q99727 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TIMP4Q99727 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TIMP4Q99727 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TIMP4Q99727 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TIMP4Q99727 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TIMP4Q99727 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.17■□□□□ 0.5
TIMP4Q99727 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TIMP4Q99727 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TIMP4Q99727 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TIMP4Q99727 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TIMP4Q99727 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.17■□□□□ 0.5
TIMP4Q99727 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TIMP4Q99727 AC093827.2-201ENST00000512654 315 ntBASIC18.17■□□□□ 0.5
TIMP4Q99727 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.17■□□□□ 0.5
TIMP4Q99727 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TIMP4Q99727 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.17■□□□□ 0.5
TIMP4Q99727 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.17■□□□□ 0.5
TIMP4Q99727 RN7SL471P-201ENST00000580476 299 ntBASIC18.17■□□□□ 0.5
TIMP4Q99727 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.17■□□□□ 0.5
TIMP4Q99727 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
TIMP4Q99727 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
TIMP4Q99727 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TIMP4Q99727 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.17■□□□□ 0.5
TIMP4Q99727 AC092720.2-201ENST00000602388 1665 ntBASIC18.17■□□□□ 0.5
TIMP4Q99727 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms