Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CGREF1Q99674 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CGREF1Q99674 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
CGREF1Q99674 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CGREF1Q99674 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CGREF1Q99674 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CGREF1Q99674 KRT8P17-201ENST00000453110 1448 ntBASIC18.83■□□□□ 0.61
CGREF1Q99674 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.83■□□□□ 0.61
CGREF1Q99674 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
CGREF1Q99674 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.83■□□□□ 0.61
CGREF1Q99674 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CGREF1Q99674 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.83■□□□□ 0.61
CGREF1Q99674 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CGREF1Q99674 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CGREF1Q99674 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CGREF1Q99674 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.83■□□□□ 0.6
CGREF1Q99674 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CGREF1Q99674 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CGREF1Q99674 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.83■□□□□ 0.6
CGREF1Q99674 AL591742.1-201ENST00000604433 565 ntBASIC18.83■□□□□ 0.6
CGREF1Q99674 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
CGREF1Q99674 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CGREF1Q99674 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CGREF1Q99674 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CGREF1Q99674 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.83■□□□□ 0.6
CGREF1Q99674 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CGREF1Q99674 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CGREF1Q99674 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CGREF1Q99674 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CGREF1Q99674 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CGREF1Q99674 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.82■□□□□ 0.6
CGREF1Q99674 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.82■□□□□ 0.6
CGREF1Q99674 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CGREF1Q99674 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
CGREF1Q99674 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CGREF1Q99674 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CGREF1Q99674 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CGREF1Q99674 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CGREF1Q99674 KRT18P61-201ENST00000585825 1298 ntBASIC18.82■□□□□ 0.6
CGREF1Q99674 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
CGREF1Q99674 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CGREF1Q99674 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CGREF1Q99674 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.82■□□□□ 0.6
CGREF1Q99674 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CGREF1Q99674 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CGREF1Q99674 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CGREF1Q99674 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.82■□□□□ 0.6
CGREF1Q99674 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CGREF1Q99674 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CGREF1Q99674 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CGREF1Q99674 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CGREF1Q99674 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.81■□□□□ 0.6
CGREF1Q99674 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CGREF1Q99674 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CGREF1Q99674 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CGREF1Q99674 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.81■□□□□ 0.6
CGREF1Q99674 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CGREF1Q99674 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.81■□□□□ 0.6
CGREF1Q99674 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.81■□□□□ 0.6
CGREF1Q99674 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CGREF1Q99674 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.81■□□□□ 0.6
CGREF1Q99674 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.81■□□□□ 0.6
CGREF1Q99674 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CGREF1Q99674 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CGREF1Q99674 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.81■□□□□ 0.6
CGREF1Q99674 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CGREF1Q99674 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.81■□□□□ 0.6
CGREF1Q99674 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
CGREF1Q99674 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CGREF1Q99674 KRT16P6-202ENST00000425692 1426 ntBASIC18.81■□□□□ 0.6
CGREF1Q99674 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CGREF1Q99674 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CGREF1Q99674 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
CGREF1Q99674 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CGREF1Q99674 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.81■□□□□ 0.6
CGREF1Q99674 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CGREF1Q99674 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CGREF1Q99674 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CGREF1Q99674 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.8■□□□□ 0.6
CGREF1Q99674 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CGREF1Q99674 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CGREF1Q99674 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CGREF1Q99674 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.8■□□□□ 0.6
CGREF1Q99674 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.8■□□□□ 0.6
CGREF1Q99674 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CGREF1Q99674 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.8■□□□□ 0.6
CGREF1Q99674 TERF1P5-201ENST00000477545 1207 ntBASIC18.8■□□□□ 0.6
CGREF1Q99674 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.8■□□□□ 0.6
CGREF1Q99674 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.8■□□□□ 0.6
CGREF1Q99674 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CGREF1Q99674 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.8■□□□□ 0.6
CGREF1Q99674 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CGREF1Q99674 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CGREF1Q99674 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CGREF1Q99674 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CGREF1Q99674 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CGREF1Q99674 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CGREF1Q99674 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CGREF1Q99674 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CGREF1Q99674 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms