Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.33■□□□□ 0.68
PKP4Q99569 SOX15-203ENST00000570788 1093 ntBASIC19.33■□□□□ 0.68
PKP4Q99569 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.33■□□□□ 0.68
PKP4Q99569 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PKP4Q99569 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PKP4Q99569 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.33■□□□□ 0.68
PKP4Q99569 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.68
PKP4Q99569 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
PKP4Q99569 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.33■□□□□ 0.68
PKP4Q99569 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
PKP4Q99569 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.32■□□□□ 0.68
PKP4Q99569 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PKP4Q99569 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PKP4Q99569 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PKP4Q99569 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PKP4Q99569 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PKP4Q99569 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PKP4Q99569 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.32■□□□□ 0.68
PKP4Q99569 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PKP4Q99569 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.32■□□□□ 0.68
PKP4Q99569 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
PKP4Q99569 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PKP4Q99569 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PKP4Q99569 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PKP4Q99569 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.32■□□□□ 0.68
PKP4Q99569 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
PKP4Q99569 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.32■□□□□ 0.68
PKP4Q99569 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.32■□□□□ 0.68
PKP4Q99569 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PKP4Q99569 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PKP4Q99569 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PKP4Q99569 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PKP4Q99569 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PKP4Q99569 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PKP4Q99569 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PKP4Q99569 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PKP4Q99569 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PKP4Q99569 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.31■□□□□ 0.68
PKP4Q99569 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PKP4Q99569 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PKP4Q99569 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PKP4Q99569 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.31■□□□□ 0.68
PKP4Q99569 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PKP4Q99569 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PKP4Q99569 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PKP4Q99569 UNC93B5-201ENST00000530315 699 ntBASIC19.31■□□□□ 0.68
PKP4Q99569 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.31■□□□□ 0.68
PKP4Q99569 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PKP4Q99569 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.31■□□□□ 0.68
PKP4Q99569 PHGDH-210ENST00000641115 1638 ntBASIC19.31■□□□□ 0.68
PKP4Q99569 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PKP4Q99569 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PKP4Q99569 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PKP4Q99569 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.31■□□□□ 0.68
PKP4Q99569 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.31■□□□□ 0.68
PKP4Q99569 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PKP4Q99569 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PKP4Q99569 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PKP4Q99569 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PKP4Q99569 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PKP4Q99569 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PKP4Q99569 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PKP4Q99569 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PKP4Q99569 AC124283.5-201ENST00000624661 1809 ntBASIC19.3■□□□□ 0.68
PKP4Q99569 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.3■□□□□ 0.68
PKP4Q99569 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.3■□□□□ 0.68
PKP4Q99569 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.3■□□□□ 0.68
PKP4Q99569 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.3■□□□□ 0.68
PKP4Q99569 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.3■□□□□ 0.68
PKP4Q99569 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.3■□□□□ 0.68
PKP4Q99569 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.3■□□□□ 0.68
PKP4Q99569 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.3■□□□□ 0.68
PKP4Q99569 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PKP4Q99569 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.3■□□□□ 0.68
PKP4Q99569 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PKP4Q99569 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PKP4Q99569 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PKP4Q99569 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PKP4Q99569 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PKP4Q99569 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
PKP4Q99569 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PKP4Q99569 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PKP4Q99569 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PKP4Q99569 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PKP4Q99569 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.29■□□□□ 0.68
PKP4Q99569 RPS2P52-201ENST00000469610 820 ntBASIC19.29■□□□□ 0.68
PKP4Q99569 UNC93B4-201ENST00000505679 747 ntBASIC19.29■□□□□ 0.68
PKP4Q99569 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PKP4Q99569 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.29■□□□□ 0.68
PKP4Q99569 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.29■□□□□ 0.68
PKP4Q99569 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.29■□□□□ 0.68
PKP4Q99569 AC120498.8-201ENST00000614275 531 ntBASIC19.29■□□□□ 0.68
PKP4Q99569 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.29■□□□□ 0.68
PKP4Q99569 TMEM179-206ENST00000616017 1645 ntBASIC19.29■□□□□ 0.68
PKP4Q99569 AFG3L1P-217ENST00000557444 2447 ntBASIC19.29■□□□□ 0.68
PKP4Q99569 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PKP4Q99569 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PKP4Q99569 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
PKP4Q99569 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PKP4Q99569 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms