Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
NOTCH4Q99466 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.56■□□□□ 0.88
NOTCH4Q99466 ECEL1P2-202ENST00000465689 757 ntBASIC20.56■□□□□ 0.88
NOTCH4Q99466 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NOTCH4Q99466 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.56■□□□□ 0.88
NOTCH4Q99466 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NOTCH4Q99466 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
NOTCH4Q99466 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NOTCH4Q99466 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.56■□□□□ 0.88
NOTCH4Q99466 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.56■□□□□ 0.88
NOTCH4Q99466 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.56■□□□□ 0.88
NOTCH4Q99466 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.56■□□□□ 0.88
NOTCH4Q99466 KRT18P16-201ENST00000510337 1294 ntBASIC20.56■□□□□ 0.88
NOTCH4Q99466 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
NOTCH4Q99466 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.56■□□□□ 0.88
NOTCH4Q99466 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NOTCH4Q99466 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.56■□□□□ 0.88
NOTCH4Q99466 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NOTCH4Q99466 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.56■□□□□ 0.88
NOTCH4Q99466 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.56■□□□□ 0.88
NOTCH4Q99466 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NOTCH4Q99466 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NOTCH4Q99466 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NOTCH4Q99466 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.55■□□□□ 0.88
NOTCH4Q99466 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
NOTCH4Q99466 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NOTCH4Q99466 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
NOTCH4Q99466 DUX4L26-201ENST00000489078 1255 ntBASIC20.55■□□□□ 0.88
NOTCH4Q99466 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.55■□□□□ 0.88
NOTCH4Q99466 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NOTCH4Q99466 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.55■□□□□ 0.88
NOTCH4Q99466 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NOTCH4Q99466 NTF6B-201ENST00000591913 560 ntBASIC20.55■□□□□ 0.88
NOTCH4Q99466 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NOTCH4Q99466 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NOTCH4Q99466 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.55■□□□□ 0.88
NOTCH4Q99466 LINC00565-201ENST00000562710 2331 ntBASIC20.55■□□□□ 0.88
NOTCH4Q99466 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NOTCH4Q99466 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.55■□□□□ 0.88
NOTCH4Q99466 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.55■□□□□ 0.88
NOTCH4Q99466 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NOTCH4Q99466 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
NOTCH4Q99466 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.54■□□□□ 0.88
NOTCH4Q99466 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.54■□□□□ 0.88
NOTCH4Q99466 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.54■□□□□ 0.88
NOTCH4Q99466 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.54■□□□□ 0.88
NOTCH4Q99466 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NOTCH4Q99466 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.54■□□□□ 0.88
NOTCH4Q99466 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NOTCH4Q99466 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NOTCH4Q99466 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
NOTCH4Q99466 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.54■□□□□ 0.88
NOTCH4Q99466 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NOTCH4Q99466 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NOTCH4Q99466 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
NOTCH4Q99466 PHGDH-210ENST00000641115 1638 ntBASIC20.54■□□□□ 0.88
NOTCH4Q99466 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NOTCH4Q99466 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NOTCH4Q99466 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.53■□□□□ 0.88
NOTCH4Q99466 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NOTCH4Q99466 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NOTCH4Q99466 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NOTCH4Q99466 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.53■□□□□ 0.88
NOTCH4Q99466 AC104076.2-201ENST00000448912 469 ntBASIC20.53■□□□□ 0.88
NOTCH4Q99466 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.53■□□□□ 0.88
NOTCH4Q99466 AC097488.1-201ENST00000507834 756 ntBASIC20.53■□□□□ 0.88
NOTCH4Q99466 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.53■□□□□ 0.88
NOTCH4Q99466 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.53■□□□□ 0.88
NOTCH4Q99466 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NOTCH4Q99466 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NOTCH4Q99466 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
NOTCH4Q99466 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NOTCH4Q99466 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NOTCH4Q99466 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NOTCH4Q99466 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
NOTCH4Q99466 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
NOTCH4Q99466 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
NOTCH4Q99466 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NOTCH4Q99466 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.53■□□□□ 0.88
NOTCH4Q99466 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.53■□□□□ 0.88
NOTCH4Q99466 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NOTCH4Q99466 AC005363.2-201ENST00000618631 242 ntBASIC20.53■□□□□ 0.88
NOTCH4Q99466 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
NOTCH4Q99466 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NOTCH4Q99466 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NOTCH4Q99466 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.52■□□□□ 0.88
NOTCH4Q99466 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NOTCH4Q99466 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.52■□□□□ 0.88
NOTCH4Q99466 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NOTCH4Q99466 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NOTCH4Q99466 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
NOTCH4Q99466 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NOTCH4Q99466 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.52■□□□□ 0.88
NOTCH4Q99466 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NOTCH4Q99466 WWOX-216ENST00000569818 525 ntBASIC20.52■□□□□ 0.88
NOTCH4Q99466 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
NOTCH4Q99466 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.52■□□□□ 0.88
NOTCH4Q99466 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NOTCH4Q99466 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
NOTCH4Q99466 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.52■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms