Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CSPG4P5Q96PW8 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CSPG4P5Q96PW8 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.48■□□□□ 0.87
CSPG4P5Q96PW8 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.48■□□□□ 0.87
CSPG4P5Q96PW8 PNMA6B-201ENST00000538162 1200 ntBASIC20.48■□□□□ 0.87
CSPG4P5Q96PW8 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.48■□□□□ 0.87
CSPG4P5Q96PW8 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.48■□□□□ 0.87
CSPG4P5Q96PW8 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.48■□□□□ 0.87
CSPG4P5Q96PW8 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.48■□□□□ 0.87
CSPG4P5Q96PW8 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CSPG4P5Q96PW8 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.48■□□□□ 0.87
CSPG4P5Q96PW8 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CSPG4P5Q96PW8 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CSPG4P5Q96PW8 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CSPG4P5Q96PW8 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.48■□□□□ 0.87
CSPG4P5Q96PW8 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CSPG4P5Q96PW8 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CSPG4P5Q96PW8 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.48■□□□□ 0.87
CSPG4P5Q96PW8 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.48■□□□□ 0.87
CSPG4P5Q96PW8 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CSPG4P5Q96PW8 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CSPG4P5Q96PW8 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CSPG4P5Q96PW8 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CSPG4P5Q96PW8 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CSPG4P5Q96PW8 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.47■□□□□ 0.87
CSPG4P5Q96PW8 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CSPG4P5Q96PW8 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CSPG4P5Q96PW8 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.47■□□□□ 0.87
CSPG4P5Q96PW8 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.47■□□□□ 0.87
CSPG4P5Q96PW8 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.47■□□□□ 0.87
CSPG4P5Q96PW8 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.47■□□□□ 0.87
CSPG4P5Q96PW8 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.47■□□□□ 0.87
CSPG4P5Q96PW8 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.47■□□□□ 0.87
CSPG4P5Q96PW8 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.47■□□□□ 0.87
CSPG4P5Q96PW8 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CSPG4P5Q96PW8 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.47■□□□□ 0.87
CSPG4P5Q96PW8 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CSPG4P5Q96PW8 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CSPG4P5Q96PW8 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CSPG4P5Q96PW8 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CSPG4P5Q96PW8 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
CSPG4P5Q96PW8 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CSPG4P5Q96PW8 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CSPG4P5Q96PW8 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CSPG4P5Q96PW8 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CSPG4P5Q96PW8 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CSPG4P5Q96PW8 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.46■□□□□ 0.87
CSPG4P5Q96PW8 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CSPG4P5Q96PW8 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CSPG4P5Q96PW8 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CSPG4P5Q96PW8 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.46■□□□□ 0.87
CSPG4P5Q96PW8 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CSPG4P5Q96PW8 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CSPG4P5Q96PW8 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CSPG4P5Q96PW8 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CSPG4P5Q96PW8 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.46■□□□□ 0.87
CSPG4P5Q96PW8 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.46■□□□□ 0.87
CSPG4P5Q96PW8 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CSPG4P5Q96PW8 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.46■□□□□ 0.87
CSPG4P5Q96PW8 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.46■□□□□ 0.87
CSPG4P5Q96PW8 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CSPG4P5Q96PW8 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CSPG4P5Q96PW8 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.46■□□□□ 0.87
CSPG4P5Q96PW8 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.46■□□□□ 0.87
CSPG4P5Q96PW8 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.46■□□□□ 0.87
CSPG4P5Q96PW8 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CSPG4P5Q96PW8 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CSPG4P5Q96PW8 AL158211.5-201ENST00000623583 2518 ntBASIC20.46■□□□□ 0.87
CSPG4P5Q96PW8 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CSPG4P5Q96PW8 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CSPG4P5Q96PW8 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CSPG4P5Q96PW8 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
CSPG4P5Q96PW8 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.45■□□□□ 0.86
CSPG4P5Q96PW8 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.45■□□□□ 0.86
CSPG4P5Q96PW8 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CSPG4P5Q96PW8 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CSPG4P5Q96PW8 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.45■□□□□ 0.86
CSPG4P5Q96PW8 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.45■□□□□ 0.86
CSPG4P5Q96PW8 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.45■□□□□ 0.86
CSPG4P5Q96PW8 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.45■□□□□ 0.86
CSPG4P5Q96PW8 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.45■□□□□ 0.86
CSPG4P5Q96PW8 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CSPG4P5Q96PW8 AC116351.2-201ENST00000606540 1585 ntBASIC20.45■□□□□ 0.86
CSPG4P5Q96PW8 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CSPG4P5Q96PW8 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.45■□□□□ 0.86
CSPG4P5Q96PW8 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.45■□□□□ 0.86
CSPG4P5Q96PW8 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CSPG4P5Q96PW8 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CSPG4P5Q96PW8 AC018553.1-201ENST00000616682 1458 ntBASIC20.44■□□□□ 0.86
CSPG4P5Q96PW8 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.44■□□□□ 0.86
CSPG4P5Q96PW8 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CSPG4P5Q96PW8 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.44■□□□□ 0.86
CSPG4P5Q96PW8 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CSPG4P5Q96PW8 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CSPG4P5Q96PW8 AC124283.5-201ENST00000624661 1809 ntBASIC20.44■□□□□ 0.86
CSPG4P5Q96PW8 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CSPG4P5Q96PW8 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CSPG4P5Q96PW8 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CSPG4P5Q96PW8 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CSPG4P5Q96PW8 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms