Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SMARCD1Q96GM5 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
SMARCD1Q96GM5 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SMARCD1Q96GM5 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
SMARCD1Q96GM5 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SMARCD1Q96GM5 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SMARCD1Q96GM5 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.9■□□□□ 0.94
SMARCD1Q96GM5 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMARCD1Q96GM5 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMARCD1Q96GM5 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMARCD1Q96GM5 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SMARCD1Q96GM5 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SMARCD1Q96GM5 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
SMARCD1Q96GM5 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
SMARCD1Q96GM5 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.9■□□□□ 0.94
SMARCD1Q96GM5 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
SMARCD1Q96GM5 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.9■□□□□ 0.94
SMARCD1Q96GM5 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMARCD1Q96GM5 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
SMARCD1Q96GM5 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.9■□□□□ 0.94
SMARCD1Q96GM5 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMARCD1Q96GM5 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMARCD1Q96GM5 AC093827.2-201ENST00000512654 315 ntBASIC20.9■□□□□ 0.94
SMARCD1Q96GM5 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.9■□□□□ 0.94
SMARCD1Q96GM5 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.9■□□□□ 0.94
SMARCD1Q96GM5 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.9■□□□□ 0.94
SMARCD1Q96GM5 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
SMARCD1Q96GM5 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMARCD1Q96GM5 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMARCD1Q96GM5 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.9■□□□□ 0.94
SMARCD1Q96GM5 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMARCD1Q96GM5 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.9■□□□□ 0.94
SMARCD1Q96GM5 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMARCD1Q96GM5 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMARCD1Q96GM5 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.89■□□□□ 0.94
SMARCD1Q96GM5 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.89■□□□□ 0.94
SMARCD1Q96GM5 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SMARCD1Q96GM5 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.94
SMARCD1Q96GM5 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.89■□□□□ 0.94
SMARCD1Q96GM5 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.89■□□□□ 0.93
SMARCD1Q96GM5 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMARCD1Q96GM5 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMARCD1Q96GM5 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMARCD1Q96GM5 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.89■□□□□ 0.93
SMARCD1Q96GM5 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SMARCD1Q96GM5 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.89■□□□□ 0.93
SMARCD1Q96GM5 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.89■□□□□ 0.93
SMARCD1Q96GM5 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.89■□□□□ 0.93
SMARCD1Q96GM5 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.89■□□□□ 0.93
SMARCD1Q96GM5 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMARCD1Q96GM5 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMARCD1Q96GM5 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMARCD1Q96GM5 AP006587.1-201ENST00000534129 1502 ntBASIC20.88■□□□□ 0.93
SMARCD1Q96GM5 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMARCD1Q96GM5 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMARCD1Q96GM5 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMARCD1Q96GM5 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SMARCD1Q96GM5 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMARCD1Q96GM5 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SMARCD1Q96GM5 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SMARCD1Q96GM5 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMARCD1Q96GM5 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.88■□□□□ 0.93
SMARCD1Q96GM5 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.88■□□□□ 0.93
SMARCD1Q96GM5 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.88■□□□□ 0.93
SMARCD1Q96GM5 AC008550.1-201ENST00000511500 884 ntBASIC20.88■□□□□ 0.93
SMARCD1Q96GM5 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SMARCD1Q96GM5 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.88■□□□□ 0.93
SMARCD1Q96GM5 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SMARCD1Q96GM5 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.88■□□□□ 0.93
SMARCD1Q96GM5 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SMARCD1Q96GM5 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMARCD1Q96GM5 AL391422.3-201ENST00000603791 2761 ntBASIC20.88■□□□□ 0.93
SMARCD1Q96GM5 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.88■□□□□ 0.93
SMARCD1Q96GM5 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMARCD1Q96GM5 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMARCD1Q96GM5 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMARCD1Q96GM5 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMARCD1Q96GM5 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMARCD1Q96GM5 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.88■□□□□ 0.93
SMARCD1Q96GM5 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMARCD1Q96GM5 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.87■□□□□ 0.93
SMARCD1Q96GM5 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMARCD1Q96GM5 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SMARCD1Q96GM5 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.87■□□□□ 0.93
SMARCD1Q96GM5 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMARCD1Q96GM5 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMARCD1Q96GM5 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.87■□□□□ 0.93
SMARCD1Q96GM5 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMARCD1Q96GM5 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
SMARCD1Q96GM5 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMARCD1Q96GM5 AC099778.1-201ENST00000568593 1911 ntBASIC20.87■□□□□ 0.93
SMARCD1Q96GM5 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
SMARCD1Q96GM5 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
SMARCD1Q96GM5 KRT16P5-201ENST00000455284 522 ntBASIC20.87■□□□□ 0.93
SMARCD1Q96GM5 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.87■□□□□ 0.93
SMARCD1Q96GM5 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.87■□□□□ 0.93
SMARCD1Q96GM5 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.87■□□□□ 0.93
SMARCD1Q96GM5 AC004264.1-201ENST00000608354 794 ntBASIC20.87■□□□□ 0.93
SMARCD1Q96GM5 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMARCD1Q96GM5 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms