Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
TRIM11Q96F44 MIR935-201ENST00000401179 91 ntBASIC20.99■□□□□ 0.95
TRIM11Q96F44 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM11Q96F44 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.99■□□□□ 0.95
TRIM11Q96F44 RAP2CP1-201ENST00000605103 478 ntBASIC20.99■□□□□ 0.95
TRIM11Q96F44 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM11Q96F44 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.99■□□□□ 0.95
TRIM11Q96F44 TREX1-205ENST00000625293 1783 ntBASIC20.99■□□□□ 0.95
TRIM11Q96F44 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM11Q96F44 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.99■□□□□ 0.95
TRIM11Q96F44 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM11Q96F44 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
TRIM11Q96F44 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM11Q96F44 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM11Q96F44 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM11Q96F44 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
TRIM11Q96F44 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM11Q96F44 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM11Q96F44 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM11Q96F44 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM11Q96F44 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.98■□□□□ 0.95
TRIM11Q96F44 GPX1P1-201ENST00000388829 606 ntBASIC20.98■□□□□ 0.95
TRIM11Q96F44 BX276092.2-201ENST00000417668 665 ntBASIC20.98■□□□□ 0.95
TRIM11Q96F44 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.98■□□□□ 0.95
TRIM11Q96F44 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.98■□□□□ 0.95
TRIM11Q96F44 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.98■□□□□ 0.95
TRIM11Q96F44 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
TRIM11Q96F44 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.98■□□□□ 0.95
TRIM11Q96F44 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.98■□□□□ 0.95
TRIM11Q96F44 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM11Q96F44 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM11Q96F44 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM11Q96F44 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.98■□□□□ 0.95
TRIM11Q96F44 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM11Q96F44 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.98■□□□□ 0.95
TRIM11Q96F44 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.98■□□□□ 0.95
TRIM11Q96F44 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM11Q96F44 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.98■□□□□ 0.95
TRIM11Q96F44 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.97■□□□□ 0.95
TRIM11Q96F44 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.97■□□□□ 0.95
TRIM11Q96F44 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM11Q96F44 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
TRIM11Q96F44 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.97■□□□□ 0.95
TRIM11Q96F44 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.97■□□□□ 0.95
TRIM11Q96F44 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.97■□□□□ 0.95
TRIM11Q96F44 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
TRIM11Q96F44 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM11Q96F44 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM11Q96F44 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.97■□□□□ 0.95
TRIM11Q96F44 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM11Q96F44 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM11Q96F44 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM11Q96F44 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
TRIM11Q96F44 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM11Q96F44 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.97■□□□□ 0.95
TRIM11Q96F44 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.97■□□□□ 0.95
TRIM11Q96F44 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.97■□□□□ 0.95
TRIM11Q96F44 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM11Q96F44 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
TRIM11Q96F44 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM11Q96F44 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM11Q96F44 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM11Q96F44 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM11Q96F44 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM11Q96F44 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
TRIM11Q96F44 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.96■□□□□ 0.95
TRIM11Q96F44 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM11Q96F44 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM11Q96F44 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM11Q96F44 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.96■□□□□ 0.95
TRIM11Q96F44 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
TRIM11Q96F44 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM11Q96F44 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.96■□□□□ 0.95
TRIM11Q96F44 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM11Q96F44 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.96■□□□□ 0.95
TRIM11Q96F44 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.96■□□□□ 0.95
TRIM11Q96F44 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM11Q96F44 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM11Q96F44 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM11Q96F44 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
TRIM11Q96F44 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.96■□□□□ 0.95
TRIM11Q96F44 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM11Q96F44 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM11Q96F44 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM11Q96F44 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM11Q96F44 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM11Q96F44 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM11Q96F44 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM11Q96F44 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
TRIM11Q96F44 CROCCP5-201ENST00000436658 830 ntBASIC20.95■□□□□ 0.94
TRIM11Q96F44 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.95■□□□□ 0.94
TRIM11Q96F44 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.95■□□□□ 0.94
TRIM11Q96F44 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM11Q96F44 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM11Q96F44 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM11Q96F44 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM11Q96F44 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM11Q96F44 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM11Q96F44 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM11Q96F44 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms