Protein–RNA interactions for Protein: Q96CP6

GRAMD1A, GRAM domain-containing protein 1A, humanhuman

Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1AQ96CP6 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
GRAMD1AQ96CP6 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GRAMD1AQ96CP6 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.31■□□□□ 0.84
GRAMD1AQ96CP6 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GRAMD1AQ96CP6 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
GRAMD1AQ96CP6 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
GRAMD1AQ96CP6 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GRAMD1AQ96CP6 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GRAMD1AQ96CP6 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
GRAMD1AQ96CP6 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
GRAMD1AQ96CP6 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
GRAMD1AQ96CP6 AL158211.5-201ENST00000623583 2518 ntBASIC20.3■□□□□ 0.84
GRAMD1AQ96CP6 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
GRAMD1AQ96CP6 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.3■□□□□ 0.84
GRAMD1AQ96CP6 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
GRAMD1AQ96CP6 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
GRAMD1AQ96CP6 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.3■□□□□ 0.84
GRAMD1AQ96CP6 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.3■□□□□ 0.84
GRAMD1AQ96CP6 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.3■□□□□ 0.84
GRAMD1AQ96CP6 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.3■□□□□ 0.84
GRAMD1AQ96CP6 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GRAMD1AQ96CP6 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GRAMD1AQ96CP6 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.3■□□□□ 0.84
GRAMD1AQ96CP6 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
GRAMD1AQ96CP6 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GRAMD1AQ96CP6 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.29■□□□□ 0.84
GRAMD1AQ96CP6 AC004408.2-201ENST00000623613 2777 ntBASIC20.29■□□□□ 0.84
GRAMD1AQ96CP6 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GRAMD1AQ96CP6 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GRAMD1AQ96CP6 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GRAMD1AQ96CP6 KRT16P2-201ENST00000414673 1423 ntBASIC20.29■□□□□ 0.84
GRAMD1AQ96CP6 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GRAMD1AQ96CP6 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GRAMD1AQ96CP6 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
GRAMD1AQ96CP6 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
GRAMD1AQ96CP6 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.29■□□□□ 0.84
GRAMD1AQ96CP6 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
GRAMD1AQ96CP6 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.29■□□□□ 0.84
GRAMD1AQ96CP6 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.29■□□□□ 0.84
GRAMD1AQ96CP6 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.29■□□□□ 0.84
GRAMD1AQ96CP6 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.29■□□□□ 0.84
GRAMD1AQ96CP6 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GRAMD1AQ96CP6 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
GRAMD1AQ96CP6 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GRAMD1AQ96CP6 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.29■□□□□ 0.84
GRAMD1AQ96CP6 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.29■□□□□ 0.84
GRAMD1AQ96CP6 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.29■□□□□ 0.84
GRAMD1AQ96CP6 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GRAMD1AQ96CP6 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
GRAMD1AQ96CP6 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.28■□□□□ 0.84
GRAMD1AQ96CP6 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
GRAMD1AQ96CP6 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GRAMD1AQ96CP6 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.28■□□□□ 0.84
GRAMD1AQ96CP6 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
GRAMD1AQ96CP6 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.28■□□□□ 0.84
GRAMD1AQ96CP6 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
GRAMD1AQ96CP6 AL591742.1-201ENST00000604433 565 ntBASIC20.28■□□□□ 0.84
GRAMD1AQ96CP6 MYC-209ENST00000641252 345 ntBASIC20.28■□□□□ 0.84
GRAMD1AQ96CP6 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GRAMD1AQ96CP6 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GRAMD1AQ96CP6 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.27■□□□□ 0.84
GRAMD1AQ96CP6 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.27■□□□□ 0.84
GRAMD1AQ96CP6 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GRAMD1AQ96CP6 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
GRAMD1AQ96CP6 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.27■□□□□ 0.84
GRAMD1AQ96CP6 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
GRAMD1AQ96CP6 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
GRAMD1AQ96CP6 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GRAMD1AQ96CP6 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GRAMD1AQ96CP6 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.27■□□□□ 0.84
GRAMD1AQ96CP6 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GRAMD1AQ96CP6 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.27■□□□□ 0.84
GRAMD1AQ96CP6 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GRAMD1AQ96CP6 BX276092.2-201ENST00000417668 665 ntBASIC20.27■□□□□ 0.84
GRAMD1AQ96CP6 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.27■□□□□ 0.84
GRAMD1AQ96CP6 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.27■□□□□ 0.84
GRAMD1AQ96CP6 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.27■□□□□ 0.84
GRAMD1AQ96CP6 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
GRAMD1AQ96CP6 AC243732.1-201ENST00000612648 864 ntBASIC20.27■□□□□ 0.84
GRAMD1AQ96CP6 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
GRAMD1AQ96CP6 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GRAMD1AQ96CP6 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
GRAMD1AQ96CP6 AC005332.7-201ENST00000614046 2005 ntBASIC20.27■□□□□ 0.84
GRAMD1AQ96CP6 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
GRAMD1AQ96CP6 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
GRAMD1AQ96CP6 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
GRAMD1AQ96CP6 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.27■□□□□ 0.83
GRAMD1AQ96CP6 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.26■□□□□ 0.83
GRAMD1AQ96CP6 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
GRAMD1AQ96CP6 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GRAMD1AQ96CP6 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GRAMD1AQ96CP6 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.26■□□□□ 0.83
GRAMD1AQ96CP6 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
GRAMD1AQ96CP6 PRORSD1P-201ENST00000295112 541 ntBASIC20.26■□□□□ 0.83
GRAMD1AQ96CP6 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
GRAMD1AQ96CP6 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
GRAMD1AQ96CP6 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.26■□□□□ 0.83
GRAMD1AQ96CP6 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
GRAMD1AQ96CP6 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.26■□□□□ 0.83
GRAMD1AQ96CP6 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms