Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SH3KBP1Q96B97 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.63■□□□□ 0.73
SH3KBP1Q96B97 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SH3KBP1Q96B97 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SH3KBP1Q96B97 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SH3KBP1Q96B97 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SH3KBP1Q96B97 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SH3KBP1Q96B97 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
SH3KBP1Q96B97 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SH3KBP1Q96B97 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
SH3KBP1Q96B97 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
SH3KBP1Q96B97 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SH3KBP1Q96B97 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SH3KBP1Q96B97 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.63■□□□□ 0.73
SH3KBP1Q96B97 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SH3KBP1Q96B97 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SH3KBP1Q96B97 GABARAPL3-202ENST00000624044 1851 ntBASIC19.62■□□□□ 0.73
SH3KBP1Q96B97 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SH3KBP1Q96B97 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.62■□□□□ 0.73
SH3KBP1Q96B97 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
SH3KBP1Q96B97 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.62■□□□□ 0.73
SH3KBP1Q96B97 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.62■□□□□ 0.73
SH3KBP1Q96B97 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SH3KBP1Q96B97 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SH3KBP1Q96B97 UBE2SP1-201ENST00000450587 669 ntBASIC19.62■□□□□ 0.73
SH3KBP1Q96B97 AC093827.2-201ENST00000512654 315 ntBASIC19.62■□□□□ 0.73
SH3KBP1Q96B97 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.62■□□□□ 0.73
SH3KBP1Q96B97 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.62■□□□□ 0.73
SH3KBP1Q96B97 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SH3KBP1Q96B97 RN7SL471P-201ENST00000580476 299 ntBASIC19.62■□□□□ 0.73
SH3KBP1Q96B97 AC120498.8-201ENST00000614275 531 ntBASIC19.62■□□□□ 0.73
SH3KBP1Q96B97 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SH3KBP1Q96B97 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SH3KBP1Q96B97 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
SH3KBP1Q96B97 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SH3KBP1Q96B97 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SH3KBP1Q96B97 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SH3KBP1Q96B97 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SH3KBP1Q96B97 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SH3KBP1Q96B97 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SH3KBP1Q96B97 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SH3KBP1Q96B97 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.62■□□□□ 0.73
SH3KBP1Q96B97 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SH3KBP1Q96B97 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SH3KBP1Q96B97 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SH3KBP1Q96B97 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SH3KBP1Q96B97 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
SH3KBP1Q96B97 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SH3KBP1Q96B97 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SH3KBP1Q96B97 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SH3KBP1Q96B97 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SH3KBP1Q96B97 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SH3KBP1Q96B97 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.61■□□□□ 0.73
SH3KBP1Q96B97 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
SH3KBP1Q96B97 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.61■□□□□ 0.73
SH3KBP1Q96B97 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.61■□□□□ 0.73
SH3KBP1Q96B97 AC023632.3-201ENST00000521633 145 ntBASIC19.61■□□□□ 0.73
SH3KBP1Q96B97 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.61■□□□□ 0.73
SH3KBP1Q96B97 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.61■□□□□ 0.73
SH3KBP1Q96B97 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SH3KBP1Q96B97 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.61■□□□□ 0.73
SH3KBP1Q96B97 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SH3KBP1Q96B97 AC069544.1-201ENST00000609399 999 ntBASIC19.61■□□□□ 0.73
SH3KBP1Q96B97 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.61■□□□□ 0.73
SH3KBP1Q96B97 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
SH3KBP1Q96B97 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SH3KBP1Q96B97 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SH3KBP1Q96B97 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SH3KBP1Q96B97 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SH3KBP1Q96B97 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SH3KBP1Q96B97 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.61■□□□□ 0.73
SH3KBP1Q96B97 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
SH3KBP1Q96B97 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SH3KBP1Q96B97 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SH3KBP1Q96B97 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SH3KBP1Q96B97 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SH3KBP1Q96B97 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SH3KBP1Q96B97 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SH3KBP1Q96B97 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SH3KBP1Q96B97 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SH3KBP1Q96B97 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.6■□□□□ 0.73
SH3KBP1Q96B97 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.6■□□□□ 0.73
SH3KBP1Q96B97 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
SH3KBP1Q96B97 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SH3KBP1Q96B97 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SH3KBP1Q96B97 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.6■□□□□ 0.73
SH3KBP1Q96B97 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.6■□□□□ 0.73
SH3KBP1Q96B97 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.6■□□□□ 0.73
SH3KBP1Q96B97 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SH3KBP1Q96B97 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.6■□□□□ 0.73
SH3KBP1Q96B97 AL359736.2-201ENST00000621992 437 ntBASIC19.6■□□□□ 0.73
SH3KBP1Q96B97 FAM197Y4-202ENST00000622692 608 ntBASIC19.6■□□□□ 0.73
SH3KBP1Q96B97 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.6■□□□□ 0.73
SH3KBP1Q96B97 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SH3KBP1Q96B97 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SH3KBP1Q96B97 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SH3KBP1Q96B97 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SH3KBP1Q96B97 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SH3KBP1Q96B97 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SH3KBP1Q96B97 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms