Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
SCAMP4Q969E2 AL121906.2-201ENST00000621597 723 ntBASIC19.74■□□□□ 0.75
SCAMP4Q969E2 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SCAMP4Q969E2 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.74■□□□□ 0.75
SCAMP4Q969E2 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
SCAMP4Q969E2 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCAMP4Q969E2 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCAMP4Q969E2 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.74■□□□□ 0.75
SCAMP4Q969E2 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCAMP4Q969E2 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.74■□□□□ 0.75
SCAMP4Q969E2 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.73■□□□□ 0.75
SCAMP4Q969E2 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SCAMP4Q969E2 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCAMP4Q969E2 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.73■□□□□ 0.75
SCAMP4Q969E2 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.73■□□□□ 0.75
SCAMP4Q969E2 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.73■□□□□ 0.75
SCAMP4Q969E2 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
SCAMP4Q969E2 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.73■□□□□ 0.75
SCAMP4Q969E2 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.73■□□□□ 0.75
SCAMP4Q969E2 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.73■□□□□ 0.75
SCAMP4Q969E2 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.73■□□□□ 0.75
SCAMP4Q969E2 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.73■□□□□ 0.75
SCAMP4Q969E2 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCAMP4Q969E2 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SCAMP4Q969E2 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.73■□□□□ 0.75
SCAMP4Q969E2 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCAMP4Q969E2 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCAMP4Q969E2 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCAMP4Q969E2 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCAMP4Q969E2 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.73■□□□□ 0.75
SCAMP4Q969E2 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
SCAMP4Q969E2 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCAMP4Q969E2 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
SCAMP4Q969E2 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCAMP4Q969E2 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
SCAMP4Q969E2 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SCAMP4Q969E2 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.72■□□□□ 0.75
SCAMP4Q969E2 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SCAMP4Q969E2 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCAMP4Q969E2 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.72■□□□□ 0.75
SCAMP4Q969E2 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCAMP4Q969E2 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SCAMP4Q969E2 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCAMP4Q969E2 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SCAMP4Q969E2 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.72■□□□□ 0.75
SCAMP4Q969E2 KRASP1-201ENST00000407852 552 ntBASIC19.72■□□□□ 0.75
SCAMP4Q969E2 AC239809.2-201ENST00000415381 517 ntBASIC19.72■□□□□ 0.75
SCAMP4Q969E2 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCAMP4Q969E2 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCAMP4Q969E2 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.72■□□□□ 0.75
SCAMP4Q969E2 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.72■□□□□ 0.75
SCAMP4Q969E2 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.72■□□□□ 0.75
SCAMP4Q969E2 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SCAMP4Q969E2 AC124016.1-201ENST00000609552 612 ntBASIC19.72■□□□□ 0.75
SCAMP4Q969E2 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCAMP4Q969E2 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SCAMP4Q969E2 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
SCAMP4Q969E2 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCAMP4Q969E2 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.72■□□□□ 0.75
SCAMP4Q969E2 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SCAMP4Q969E2 PHGDH-210ENST00000641115 1638 ntBASIC19.72■□□□□ 0.75
SCAMP4Q969E2 PCDHAC2-203ENST00000615316 3011 ntBASIC19.72■□□□□ 0.75
SCAMP4Q969E2 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCAMP4Q969E2 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCAMP4Q969E2 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
SCAMP4Q969E2 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCAMP4Q969E2 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCAMP4Q969E2 AC116351.2-201ENST00000606540 1585 ntBASIC19.71■□□□□ 0.75
SCAMP4Q969E2 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.71■□□□□ 0.75
SCAMP4Q969E2 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCAMP4Q969E2 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCAMP4Q969E2 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SCAMP4Q969E2 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCAMP4Q969E2 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
SCAMP4Q969E2 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.71■□□□□ 0.75
SCAMP4Q969E2 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.71■□□□□ 0.75
SCAMP4Q969E2 PRKY-204ENST00000533551 1019 ntBASIC19.71■□□□□ 0.75
SCAMP4Q969E2 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.71■□□□□ 0.75
SCAMP4Q969E2 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.71■□□□□ 0.75
SCAMP4Q969E2 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.71■□□□□ 0.75
SCAMP4Q969E2 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
SCAMP4Q969E2 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.71■□□□□ 0.75
SCAMP4Q969E2 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
SCAMP4Q969E2 FAM197Y4-202ENST00000622692 608 ntBASIC19.71■□□□□ 0.75
SCAMP4Q969E2 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.71■□□□□ 0.75
SCAMP4Q969E2 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCAMP4Q969E2 AC018553.1-201ENST00000616682 1458 ntBASIC19.71■□□□□ 0.75
SCAMP4Q969E2 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCAMP4Q969E2 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.71■□□□□ 0.75
SCAMP4Q969E2 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCAMP4Q969E2 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCAMP4Q969E2 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.7■□□□□ 0.74
SCAMP4Q969E2 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SCAMP4Q969E2 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.7■□□□□ 0.74
SCAMP4Q969E2 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCAMP4Q969E2 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.7■□□□□ 0.74
SCAMP4Q969E2 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SCAMP4Q969E2 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.7■□□□□ 0.74
SCAMP4Q969E2 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SCAMP4Q969E2 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms