Protein–RNA interactions for Protein: Q92954

PRG4, Proteoglycan 4, humanhuman

Predicted RBP Predictions only

Length 1,404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRG4Q92954 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
PRG4Q92954 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
PRG4Q92954 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
PRG4Q92954 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
PRG4Q92954 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC31.77■■■□□ 2.68
PRG4Q92954 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC31.77■■■□□ 2.68
PRG4Q92954 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC31.77■■■□□ 2.68
PRG4Q92954 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC31.77■■■□□ 2.68
PRG4Q92954 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC31.77■■■□□ 2.68
PRG4Q92954 AL023803.3-201ENST00000615559 522 ntBASIC31.77■■■□□ 2.68
PRG4Q92954 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC31.77■■■□□ 2.68
PRG4Q92954 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
PRG4Q92954 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC31.77■■■□□ 2.68
PRG4Q92954 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
PRG4Q92954 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC31.77■■■□□ 2.68
PRG4Q92954 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC31.76■■■□□ 2.68
PRG4Q92954 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC31.76■■■□□ 2.68
PRG4Q92954 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC31.76■■■□□ 2.68
PRG4Q92954 DAP-202ENST00000432074 1048 ntTSL 2 BASIC31.76■■■□□ 2.68
PRG4Q92954 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC31.76■■■□□ 2.68
PRG4Q92954 IRF5-214ENST00000613821 595 ntTSL 5 BASIC31.76■■■□□ 2.68
PRG4Q92954 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC31.76■■■□□ 2.67
PRG4Q92954 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
PRG4Q92954 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC31.76■■■□□ 2.67
PRG4Q92954 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC31.76■■■□□ 2.67
PRG4Q92954 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC31.76■■■□□ 2.67
PRG4Q92954 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC31.75■■■□□ 2.67
PRG4Q92954 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
PRG4Q92954 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
PRG4Q92954 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC31.75■■■□□ 2.67
PRG4Q92954 AL023973.1-201ENST00000624619 620 ntBASIC31.75■■■□□ 2.67
PRG4Q92954 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
PRG4Q92954 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
PRG4Q92954 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC31.75■■■□□ 2.67
PRG4Q92954 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
PRG4Q92954 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC31.75■■■□□ 2.67
PRG4Q92954 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
PRG4Q92954 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
PRG4Q92954 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC31.75■■■□□ 2.67
PRG4Q92954 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
PRG4Q92954 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
PRG4Q92954 AC004951.3-201ENST00000418645 1148 ntBASIC31.75■■■□□ 2.67
PRG4Q92954 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC31.75■■■□□ 2.67
PRG4Q92954 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC31.75■■■□□ 2.67
PRG4Q92954 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
PRG4Q92954 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC31.75■■■□□ 2.67
PRG4Q92954 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
PRG4Q92954 PVRIG2P-201ENST00000435460 978 ntBASIC31.74■■■□□ 2.67
PRG4Q92954 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC31.74■■■□□ 2.67
PRG4Q92954 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC31.74■■■□□ 2.67
PRG4Q92954 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
PRG4Q92954 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC31.73■■■□□ 2.67
PRG4Q92954 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC31.73■■■□□ 2.67
PRG4Q92954 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
PRG4Q92954 PTPA-216ENST00000432651 857 ntTSL 2 BASIC31.73■■■□□ 2.67
PRG4Q92954 TSPY21P-201ENST00000433481 731 ntBASIC31.73■■■□□ 2.67
PRG4Q92954 TSPY23P-201ENST00000440136 739 ntBASIC31.73■■■□□ 2.67
PRG4Q92954 DYM-203ENST00000442713 2147 ntTSL 2 BASIC31.73■■■□□ 2.67
PRG4Q92954 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
PRG4Q92954 AC083849.1-201ENST00000615227 514 ntBASIC31.73■■■□□ 2.67
PRG4Q92954 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
PRG4Q92954 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
PRG4Q92954 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC31.72■■■□□ 2.67
PRG4Q92954 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
PRG4Q92954 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC31.72■■■□□ 2.67
PRG4Q92954 GXYLT1P6-201ENST00000456472 1187 ntBASIC31.72■■■□□ 2.67
PRG4Q92954 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC31.72■■■□□ 2.67
PRG4Q92954 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC31.72■■■□□ 2.67
PRG4Q92954 HLA-A-209ENST00000638375 975 ntBASIC31.72■■■□□ 2.67
PRG4Q92954 AC116351.2-201ENST00000606540 1585 ntBASIC31.72■■■□□ 2.67
PRG4Q92954 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
PRG4Q92954 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC31.72■■■□□ 2.67
PRG4Q92954 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
PRG4Q92954 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
PRG4Q92954 H19-201ENST00000411754 1788 ntTSL 5 BASIC31.71■■■□□ 2.67
PRG4Q92954 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC31.71■■■□□ 2.67
PRG4Q92954 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
PRG4Q92954 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC31.71■■■□□ 2.67
PRG4Q92954 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
PRG4Q92954 PARN-205ENST00000539279 1557 ntTSL 2 BASIC31.7■■■□□ 2.67
PRG4Q92954 TERT-206ENST00000508104 2486 ntTSL 5 BASIC31.7■■■□□ 2.67
PRG4Q92954 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
PRG4Q92954 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
PRG4Q92954 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
PRG4Q92954 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC31.7■■■□□ 2.67
PRG4Q92954 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
PRG4Q92954 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
PRG4Q92954 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
PRG4Q92954 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
PRG4Q92954 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC31.7■■■□□ 2.67
PRG4Q92954 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
PRG4Q92954 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
PRG4Q92954 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
PRG4Q92954 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC31.69■■■□□ 2.66
PRG4Q92954 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
PRG4Q92954 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
PRG4Q92954 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC31.69■■■□□ 2.66
PRG4Q92954 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
PRG4Q92954 TUBB8P6-201ENST00000436895 1288 ntBASIC31.69■■■□□ 2.66
PRG4Q92954 AL031432.5-201ENST00000641059 760 ntBASIC31.69■■■□□ 2.66
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms