Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
RAB40AQ8WXH6 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RAB40AQ8WXH6 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB40AQ8WXH6 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
RAB40AQ8WXH6 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB40AQ8WXH6 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
RAB40AQ8WXH6 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.41■□□□□ 0.38
RAB40AQ8WXH6 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RAB40AQ8WXH6 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB40AQ8WXH6 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB40AQ8WXH6 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
RAB40AQ8WXH6 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
RAB40AQ8WXH6 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.4■□□□□ 0.38
RAB40AQ8WXH6 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
RAB40AQ8WXH6 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB40AQ8WXH6 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.4■□□□□ 0.38
RAB40AQ8WXH6 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB40AQ8WXH6 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB40AQ8WXH6 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB40AQ8WXH6 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RAB40AQ8WXH6 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.4■□□□□ 0.38
RAB40AQ8WXH6 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB40AQ8WXH6 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.4■□□□□ 0.38
RAB40AQ8WXH6 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.4■□□□□ 0.38
RAB40AQ8WXH6 CROCCP5-201ENST00000436658 830 ntBASIC17.4■□□□□ 0.38
RAB40AQ8WXH6 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
RAB40AQ8WXH6 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB40AQ8WXH6 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RAB40AQ8WXH6 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RAB40AQ8WXH6 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.4■□□□□ 0.38
RAB40AQ8WXH6 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.4■□□□□ 0.38
RAB40AQ8WXH6 AC010536.3-201ENST00000620306 533 ntBASIC17.4■□□□□ 0.38
RAB40AQ8WXH6 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB40AQ8WXH6 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB40AQ8WXH6 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RAB40AQ8WXH6 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB40AQ8WXH6 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB40AQ8WXH6 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
RAB40AQ8WXH6 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
RAB40AQ8WXH6 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB40AQ8WXH6 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RAB40AQ8WXH6 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB40AQ8WXH6 AL691432.2-201ENST00000607222 2038 ntBASIC17.39■□□□□ 0.37
RAB40AQ8WXH6 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB40AQ8WXH6 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RAB40AQ8WXH6 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
RAB40AQ8WXH6 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.39■□□□□ 0.37
RAB40AQ8WXH6 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.39■□□□□ 0.37
RAB40AQ8WXH6 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.39■□□□□ 0.37
RAB40AQ8WXH6 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.39■□□□□ 0.37
RAB40AQ8WXH6 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB40AQ8WXH6 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RAB40AQ8WXH6 Z82202.1-201ENST00000623446 1880 ntBASIC17.39■□□□□ 0.37
RAB40AQ8WXH6 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB40AQ8WXH6 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB40AQ8WXH6 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB40AQ8WXH6 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RAB40AQ8WXH6 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB40AQ8WXH6 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB40AQ8WXH6 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
RAB40AQ8WXH6 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB40AQ8WXH6 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
RAB40AQ8WXH6 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB40AQ8WXH6 TREX1-205ENST00000625293 1783 ntBASIC17.38■□□□□ 0.37
RAB40AQ8WXH6 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.38■□□□□ 0.37
RAB40AQ8WXH6 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB40AQ8WXH6 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB40AQ8WXH6 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.38■□□□□ 0.37
RAB40AQ8WXH6 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB40AQ8WXH6 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RAB40AQ8WXH6 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.38■□□□□ 0.37
RAB40AQ8WXH6 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.38■□□□□ 0.37
RAB40AQ8WXH6 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.38■□□□□ 0.37
RAB40AQ8WXH6 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB40AQ8WXH6 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB40AQ8WXH6 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB40AQ8WXH6 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB40AQ8WXH6 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RAB40AQ8WXH6 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB40AQ8WXH6 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB40AQ8WXH6 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB40AQ8WXH6 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
RAB40AQ8WXH6 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB40AQ8WXH6 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RAB40AQ8WXH6 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB40AQ8WXH6 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
RAB40AQ8WXH6 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB40AQ8WXH6 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RAB40AQ8WXH6 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB40AQ8WXH6 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB40AQ8WXH6 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RAB40AQ8WXH6 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.37■□□□□ 0.37
RAB40AQ8WXH6 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.37■□□□□ 0.37
RAB40AQ8WXH6 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RAB40AQ8WXH6 MIR663A-201ENST00000385250 93 ntBASIC17.37■□□□□ 0.37
RAB40AQ8WXH6 HLA-L-209ENST00000420110 1011 ntBASIC17.37■□□□□ 0.37
RAB40AQ8WXH6 TERF1P5-201ENST00000477545 1207 ntBASIC17.37■□□□□ 0.37
RAB40AQ8WXH6 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RAB40AQ8WXH6 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
RAB40AQ8WXH6 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms