Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATL1Q8WXF7 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
ATL1Q8WXF7 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATL1Q8WXF7 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ATL1Q8WXF7 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATL1Q8WXF7 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATL1Q8WXF7 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ATL1Q8WXF7 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.36■□□□□ 0.69
ATL1Q8WXF7 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
ATL1Q8WXF7 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATL1Q8WXF7 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
ATL1Q8WXF7 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATL1Q8WXF7 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.36■□□□□ 0.69
ATL1Q8WXF7 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATL1Q8WXF7 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATL1Q8WXF7 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATL1Q8WXF7 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATL1Q8WXF7 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATL1Q8WXF7 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.36■□□□□ 0.69
ATL1Q8WXF7 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.36■□□□□ 0.69
ATL1Q8WXF7 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.36■□□□□ 0.69
ATL1Q8WXF7 AC133041.1-202ENST00000642053 222 ntBASIC19.36■□□□□ 0.69
ATL1Q8WXF7 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.36■□□□□ 0.69
ATL1Q8WXF7 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATL1Q8WXF7 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATL1Q8WXF7 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
ATL1Q8WXF7 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATL1Q8WXF7 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATL1Q8WXF7 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ATL1Q8WXF7 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.35■□□□□ 0.69
ATL1Q8WXF7 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.35■□□□□ 0.69
ATL1Q8WXF7 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
ATL1Q8WXF7 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATL1Q8WXF7 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.35■□□□□ 0.69
ATL1Q8WXF7 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
ATL1Q8WXF7 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATL1Q8WXF7 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATL1Q8WXF7 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.35■□□□□ 0.69
ATL1Q8WXF7 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.35■□□□□ 0.69
ATL1Q8WXF7 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.35■□□□□ 0.69
ATL1Q8WXF7 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.35■□□□□ 0.69
ATL1Q8WXF7 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.35■□□□□ 0.69
ATL1Q8WXF7 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.35■□□□□ 0.69
ATL1Q8WXF7 AC005829.2-201ENST00000571422 1056 ntBASIC19.35■□□□□ 0.69
ATL1Q8WXF7 AC104771.1-201ENST00000603335 964 ntBASIC19.35■□□□□ 0.69
ATL1Q8WXF7 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATL1Q8WXF7 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATL1Q8WXF7 MYC-209ENST00000641252 345 ntBASIC19.35■□□□□ 0.69
ATL1Q8WXF7 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ATL1Q8WXF7 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATL1Q8WXF7 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.35■□□□□ 0.69
ATL1Q8WXF7 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
ATL1Q8WXF7 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
ATL1Q8WXF7 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.35■□□□□ 0.69
ATL1Q8WXF7 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATL1Q8WXF7 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.35■□□□□ 0.69
ATL1Q8WXF7 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.35■□□□□ 0.69
ATL1Q8WXF7 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
ATL1Q8WXF7 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ATL1Q8WXF7 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATL1Q8WXF7 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATL1Q8WXF7 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ATL1Q8WXF7 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
ATL1Q8WXF7 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ATL1Q8WXF7 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATL1Q8WXF7 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
ATL1Q8WXF7 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ATL1Q8WXF7 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATL1Q8WXF7 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATL1Q8WXF7 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATL1Q8WXF7 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
ATL1Q8WXF7 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
ATL1Q8WXF7 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATL1Q8WXF7 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATL1Q8WXF7 AC142086.2-201ENST00000569753 217 ntBASIC19.34■□□□□ 0.69
ATL1Q8WXF7 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATL1Q8WXF7 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
ATL1Q8WXF7 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATL1Q8WXF7 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATL1Q8WXF7 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
ATL1Q8WXF7 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATL1Q8WXF7 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATL1Q8WXF7 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.34■□□□□ 0.69
ATL1Q8WXF7 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.34■□□□□ 0.69
ATL1Q8WXF7 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.34■□□□□ 0.69
ATL1Q8WXF7 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATL1Q8WXF7 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ATL1Q8WXF7 AC009237.14-201ENST00000609975 1594 ntBASIC19.33■□□□□ 0.69
ATL1Q8WXF7 AP001271.2-201ENST00000624018 1556 ntBASIC19.33■□□□□ 0.69
ATL1Q8WXF7 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ATL1Q8WXF7 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.33■□□□□ 0.69
ATL1Q8WXF7 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ATL1Q8WXF7 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ATL1Q8WXF7 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATL1Q8WXF7 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
ATL1Q8WXF7 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATL1Q8WXF7 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.33■□□□□ 0.68
ATL1Q8WXF7 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ATL1Q8WXF7 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.33■□□□□ 0.68
ATL1Q8WXF7 HLA-B-256ENST00000639848 1089 ntBASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms