Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMIM4Q8WVI0 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SMIM4Q8WVI0 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.96■□□□□ 0.31
SMIM4Q8WVI0 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMIM4Q8WVI0 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMIM4Q8WVI0 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC16.96■□□□□ 0.31
SMIM4Q8WVI0 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC16.96■□□□□ 0.31
SMIM4Q8WVI0 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
SMIM4Q8WVI0 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC16.96■□□□□ 0.31
SMIM4Q8WVI0 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMIM4Q8WVI0 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SMIM4Q8WVI0 AC126544.1-201ENST00000580842 1059 ntBASIC16.96■□□□□ 0.31
SMIM4Q8WVI0 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.96■□□□□ 0.31
SMIM4Q8WVI0 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.96■□□□□ 0.31
SMIM4Q8WVI0 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SMIM4Q8WVI0 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SMIM4Q8WVI0 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMIM4Q8WVI0 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMIM4Q8WVI0 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SMIM4Q8WVI0 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SMIM4Q8WVI0 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.96■□□□□ 0.3
SMIM4Q8WVI0 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC16.96■□□□□ 0.3
SMIM4Q8WVI0 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SMIM4Q8WVI0 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SMIM4Q8WVI0 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.3
SMIM4Q8WVI0 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
SMIM4Q8WVI0 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.95■□□□□ 0.3
SMIM4Q8WVI0 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.95■□□□□ 0.3
SMIM4Q8WVI0 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.95■□□□□ 0.3
SMIM4Q8WVI0 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMIM4Q8WVI0 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SMIM4Q8WVI0 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC16.95■□□□□ 0.3
SMIM4Q8WVI0 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.95■□□□□ 0.3
SMIM4Q8WVI0 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMIM4Q8WVI0 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMIM4Q8WVI0 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC16.95■□□□□ 0.3
SMIM4Q8WVI0 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMIM4Q8WVI0 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC16.95■□□□□ 0.3
SMIM4Q8WVI0 AC233992.3-201ENST00000607491 485 ntBASIC16.95■□□□□ 0.3
SMIM4Q8WVI0 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.95■□□□□ 0.3
SMIM4Q8WVI0 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SMIM4Q8WVI0 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMIM4Q8WVI0 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SMIM4Q8WVI0 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMIM4Q8WVI0 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC16.95■□□□□ 0.3
SMIM4Q8WVI0 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SMIM4Q8WVI0 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMIM4Q8WVI0 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMIM4Q8WVI0 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMIM4Q8WVI0 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMIM4Q8WVI0 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SMIM4Q8WVI0 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMIM4Q8WVI0 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMIM4Q8WVI0 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SMIM4Q8WVI0 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
SMIM4Q8WVI0 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMIM4Q8WVI0 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SMIM4Q8WVI0 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.94■□□□□ 0.3
SMIM4Q8WVI0 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SMIM4Q8WVI0 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.94■□□□□ 0.3
SMIM4Q8WVI0 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMIM4Q8WVI0 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC16.94■□□□□ 0.3
SMIM4Q8WVI0 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SMIM4Q8WVI0 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMIM4Q8WVI0 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC16.94■□□□□ 0.3
SMIM4Q8WVI0 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC16.94■□□□□ 0.3
SMIM4Q8WVI0 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC16.94■□□□□ 0.3
SMIM4Q8WVI0 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMIM4Q8WVI0 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC16.94■□□□□ 0.3
SMIM4Q8WVI0 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SMIM4Q8WVI0 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMIM4Q8WVI0 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.94■□□□□ 0.3
SMIM4Q8WVI0 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMIM4Q8WVI0 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMIM4Q8WVI0 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMIM4Q8WVI0 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
SMIM4Q8WVI0 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMIM4Q8WVI0 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMIM4Q8WVI0 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC16.93■□□□□ 0.3
SMIM4Q8WVI0 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SMIM4Q8WVI0 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SMIM4Q8WVI0 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMIM4Q8WVI0 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMIM4Q8WVI0 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMIM4Q8WVI0 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC16.93■□□□□ 0.3
SMIM4Q8WVI0 TRIR-202ENST00000588213 841 ntTSL 3 BASIC16.93■□□□□ 0.3
SMIM4Q8WVI0 FAM21FP-204ENST00000608637 956 ntBASIC16.93■□□□□ 0.3
SMIM4Q8WVI0 AC020763.4-201ENST00000623414 4170 ntBASIC16.93■□□□□ 0.3
SMIM4Q8WVI0 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMIM4Q8WVI0 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SMIM4Q8WVI0 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.93■□□□□ 0.3
SMIM4Q8WVI0 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC16.92■□□□□ 0.3
SMIM4Q8WVI0 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMIM4Q8WVI0 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SMIM4Q8WVI0 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
SMIM4Q8WVI0 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMIM4Q8WVI0 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMIM4Q8WVI0 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.92■□□□□ 0.3
SMIM4Q8WVI0 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SMIM4Q8WVI0 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms