Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RPS4Y2Q8TD47 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RPS4Y2Q8TD47 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RPS4Y2Q8TD47 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
RPS4Y2Q8TD47 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RPS4Y2Q8TD47 LINC01465-201ENST00000408887 1940 ntBASIC17.37■□□□□ 0.37
RPS4Y2Q8TD47 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.37■□□□□ 0.37
RPS4Y2Q8TD47 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RPS4Y2Q8TD47 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RPS4Y2Q8TD47 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RPS4Y2Q8TD47 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RPS4Y2Q8TD47 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.36■□□□□ 0.37
RPS4Y2Q8TD47 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RPS4Y2Q8TD47 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RPS4Y2Q8TD47 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RPS4Y2Q8TD47 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RPS4Y2Q8TD47 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
RPS4Y2Q8TD47 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RPS4Y2Q8TD47 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
RPS4Y2Q8TD47 KRT19P1-201ENST00000405746 1186 ntBASIC17.36■□□□□ 0.37
RPS4Y2Q8TD47 PARL-206ENST00000435888 1098 ntTSL 5 BASIC17.36■□□□□ 0.37
RPS4Y2Q8TD47 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.36■□□□□ 0.37
RPS4Y2Q8TD47 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.36■□□□□ 0.37
RPS4Y2Q8TD47 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.36■□□□□ 0.37
RPS4Y2Q8TD47 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.36■□□□□ 0.37
RPS4Y2Q8TD47 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
RPS4Y2Q8TD47 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RPS4Y2Q8TD47 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.36■□□□□ 0.37
RPS4Y2Q8TD47 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RPS4Y2Q8TD47 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RPS4Y2Q8TD47 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
RPS4Y2Q8TD47 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RPS4Y2Q8TD47 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RPS4Y2Q8TD47 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RPS4Y2Q8TD47 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RPS4Y2Q8TD47 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPS4Y2Q8TD47 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RPS4Y2Q8TD47 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.35■□□□□ 0.37
RPS4Y2Q8TD47 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPS4Y2Q8TD47 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPS4Y2Q8TD47 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPS4Y2Q8TD47 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPS4Y2Q8TD47 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPS4Y2Q8TD47 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
RPS4Y2Q8TD47 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC17.35■□□□□ 0.37
RPS4Y2Q8TD47 AC007322.4-201ENST00000509611 723 ntBASIC17.35■□□□□ 0.37
RPS4Y2Q8TD47 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RPS4Y2Q8TD47 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RPS4Y2Q8TD47 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC17.35■□□□□ 0.37
RPS4Y2Q8TD47 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RPS4Y2Q8TD47 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPS4Y2Q8TD47 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RPS4Y2Q8TD47 KRT8P20-201ENST00000423953 1409 ntBASIC17.35■□□□□ 0.37
RPS4Y2Q8TD47 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.35■□□□□ 0.37
RPS4Y2Q8TD47 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPS4Y2Q8TD47 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
RPS4Y2Q8TD47 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPS4Y2Q8TD47 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
RPS4Y2Q8TD47 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.35■□□□□ 0.37
RPS4Y2Q8TD47 AL138781.2-201ENST00000617896 1843 ntBASIC17.35■□□□□ 0.37
RPS4Y2Q8TD47 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPS4Y2Q8TD47 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPS4Y2Q8TD47 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.35■□□□□ 0.37
RPS4Y2Q8TD47 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
RPS4Y2Q8TD47 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RPS4Y2Q8TD47 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPS4Y2Q8TD47 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPS4Y2Q8TD47 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPS4Y2Q8TD47 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPS4Y2Q8TD47 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.34■□□□□ 0.37
RPS4Y2Q8TD47 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPS4Y2Q8TD47 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
RPS4Y2Q8TD47 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPS4Y2Q8TD47 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RPS4Y2Q8TD47 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPS4Y2Q8TD47 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPS4Y2Q8TD47 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPS4Y2Q8TD47 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPS4Y2Q8TD47 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RPS4Y2Q8TD47 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.34■□□□□ 0.37
RPS4Y2Q8TD47 TERF1P5-201ENST00000477545 1207 ntBASIC17.34■□□□□ 0.37
RPS4Y2Q8TD47 AL162430.1-201ENST00000480705 870 ntBASIC17.34■□□□□ 0.37
RPS4Y2Q8TD47 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.34■□□□□ 0.37
RPS4Y2Q8TD47 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPS4Y2Q8TD47 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RPS4Y2Q8TD47 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.34■□□□□ 0.37
RPS4Y2Q8TD47 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPS4Y2Q8TD47 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPS4Y2Q8TD47 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPS4Y2Q8TD47 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
RPS4Y2Q8TD47 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.33■□□□□ 0.37
RPS4Y2Q8TD47 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RPS4Y2Q8TD47 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RPS4Y2Q8TD47 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RPS4Y2Q8TD47 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
RPS4Y2Q8TD47 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
RPS4Y2Q8TD47 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.33■□□□□ 0.37
RPS4Y2Q8TD47 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RPS4Y2Q8TD47 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.33■□□□□ 0.37
RPS4Y2Q8TD47 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms