Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CCHCR1Q8TD31 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.65■□□□□ 0.9
CCHCR1Q8TD31 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCHCR1Q8TD31 AL356652.1-201ENST00000615962 565 ntBASIC20.65■□□□□ 0.9
CCHCR1Q8TD31 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCHCR1Q8TD31 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCHCR1Q8TD31 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.65■□□□□ 0.9
CCHCR1Q8TD31 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCHCR1Q8TD31 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCHCR1Q8TD31 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
CCHCR1Q8TD31 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCHCR1Q8TD31 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCHCR1Q8TD31 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.64■□□□□ 0.9
CCHCR1Q8TD31 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CCHCR1Q8TD31 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.64■□□□□ 0.89
CCHCR1Q8TD31 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCHCR1Q8TD31 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.64■□□□□ 0.89
CCHCR1Q8TD31 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
CCHCR1Q8TD31 CYP2T1P-201ENST00000432607 1285 ntBASIC20.64■□□□□ 0.89
CCHCR1Q8TD31 CROCCP5-201ENST00000436658 830 ntBASIC20.64■□□□□ 0.89
CCHCR1Q8TD31 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
CCHCR1Q8TD31 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CCHCR1Q8TD31 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.64■□□□□ 0.89
CCHCR1Q8TD31 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.64■□□□□ 0.89
CCHCR1Q8TD31 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCHCR1Q8TD31 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCHCR1Q8TD31 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCHCR1Q8TD31 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.64■□□□□ 0.89
CCHCR1Q8TD31 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CCHCR1Q8TD31 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCHCR1Q8TD31 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCHCR1Q8TD31 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCHCR1Q8TD31 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
CCHCR1Q8TD31 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCHCR1Q8TD31 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CCHCR1Q8TD31 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCHCR1Q8TD31 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCHCR1Q8TD31 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCHCR1Q8TD31 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCHCR1Q8TD31 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCHCR1Q8TD31 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.63■□□□□ 0.89
CCHCR1Q8TD31 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.63■□□□□ 0.89
CCHCR1Q8TD31 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.63■□□□□ 0.89
CCHCR1Q8TD31 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCHCR1Q8TD31 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCHCR1Q8TD31 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.63■□□□□ 0.89
CCHCR1Q8TD31 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCHCR1Q8TD31 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCHCR1Q8TD31 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCHCR1Q8TD31 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CCHCR1Q8TD31 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
CCHCR1Q8TD31 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCHCR1Q8TD31 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CCHCR1Q8TD31 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.62■□□□□ 0.89
CCHCR1Q8TD31 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCHCR1Q8TD31 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.62■□□□□ 0.89
CCHCR1Q8TD31 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCHCR1Q8TD31 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.62■□□□□ 0.89
CCHCR1Q8TD31 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.62■□□□□ 0.89
CCHCR1Q8TD31 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.62■□□□□ 0.89
CCHCR1Q8TD31 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.62■□□□□ 0.89
CCHCR1Q8TD31 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCHCR1Q8TD31 OR10C1-204ENST00000622521 1039 ntBASIC20.62■□□□□ 0.89
CCHCR1Q8TD31 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.62■□□□□ 0.89
CCHCR1Q8TD31 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCHCR1Q8TD31 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.62■□□□□ 0.89
CCHCR1Q8TD31 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.62■□□□□ 0.89
CCHCR1Q8TD31 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CCHCR1Q8TD31 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
CCHCR1Q8TD31 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.62■□□□□ 0.89
CCHCR1Q8TD31 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCHCR1Q8TD31 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.61■□□□□ 0.89
CCHCR1Q8TD31 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCHCR1Q8TD31 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.61■□□□□ 0.89
CCHCR1Q8TD31 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCHCR1Q8TD31 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCHCR1Q8TD31 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.61■□□□□ 0.89
CCHCR1Q8TD31 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCHCR1Q8TD31 RARRES2P4-201ENST00000514074 484 ntBASIC20.61■□□□□ 0.89
CCHCR1Q8TD31 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.61■□□□□ 0.89
CCHCR1Q8TD31 AC016405.3-201ENST00000607710 860 ntBASIC20.61■□□□□ 0.89
CCHCR1Q8TD31 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCHCR1Q8TD31 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCHCR1Q8TD31 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.61■□□□□ 0.89
CCHCR1Q8TD31 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.61■□□□□ 0.89
CCHCR1Q8TD31 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.61■□□□□ 0.89
CCHCR1Q8TD31 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCHCR1Q8TD31 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCHCR1Q8TD31 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
CCHCR1Q8TD31 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCHCR1Q8TD31 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCHCR1Q8TD31 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.6■□□□□ 0.89
CCHCR1Q8TD31 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.6■□□□□ 0.89
CCHCR1Q8TD31 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.6■□□□□ 0.89
CCHCR1Q8TD31 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CCHCR1Q8TD31 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCHCR1Q8TD31 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.6■□□□□ 0.89
CCHCR1Q8TD31 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCHCR1Q8TD31 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CCHCR1Q8TD31 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms