Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 AC009237.14-201ENST00000609975 1594 ntBASIC18.11■□□□□ 0.49
CNIH3Q8TBE1 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNIH3Q8TBE1 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.11■□□□□ 0.49
CNIH3Q8TBE1 CROCCP3-202ENST00000420820 1947 ntBASIC18.11■□□□□ 0.49
CNIH3Q8TBE1 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CNIH3Q8TBE1 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CNIH3Q8TBE1 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
CNIH3Q8TBE1 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNIH3Q8TBE1 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNIH3Q8TBE1 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CNIH3Q8TBE1 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNIH3Q8TBE1 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNIH3Q8TBE1 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CNIH3Q8TBE1 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.1■□□□□ 0.49
CNIH3Q8TBE1 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNIH3Q8TBE1 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.1■□□□□ 0.49
CNIH3Q8TBE1 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.1■□□□□ 0.49
CNIH3Q8TBE1 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNIH3Q8TBE1 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNIH3Q8TBE1 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
CNIH3Q8TBE1 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNIH3Q8TBE1 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CNIH3Q8TBE1 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.1■□□□□ 0.49
CNIH3Q8TBE1 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNIH3Q8TBE1 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.1■□□□□ 0.49
CNIH3Q8TBE1 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNIH3Q8TBE1 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNIH3Q8TBE1 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.1■□□□□ 0.49
CNIH3Q8TBE1 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.1■□□□□ 0.49
CNIH3Q8TBE1 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CNIH3Q8TBE1 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNIH3Q8TBE1 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNIH3Q8TBE1 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CNIH3Q8TBE1 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNIH3Q8TBE1 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CNIH3Q8TBE1 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CNIH3Q8TBE1 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CNIH3Q8TBE1 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNIH3Q8TBE1 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNIH3Q8TBE1 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.09■□□□□ 0.49
CNIH3Q8TBE1 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNIH3Q8TBE1 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNIH3Q8TBE1 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CNIH3Q8TBE1 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNIH3Q8TBE1 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.09■□□□□ 0.49
CNIH3Q8TBE1 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.09■□□□□ 0.49
CNIH3Q8TBE1 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.09■□□□□ 0.49
CNIH3Q8TBE1 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CNIH3Q8TBE1 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.09■□□□□ 0.49
CNIH3Q8TBE1 AC018470.1-201ENST00000624790 3129 ntBASIC18.09■□□□□ 0.49
CNIH3Q8TBE1 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CNIH3Q8TBE1 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CNIH3Q8TBE1 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CNIH3Q8TBE1 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
CNIH3Q8TBE1 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CNIH3Q8TBE1 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.49
CNIH3Q8TBE1 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
CNIH3Q8TBE1 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CNIH3Q8TBE1 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.08■□□□□ 0.48
CNIH3Q8TBE1 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CNIH3Q8TBE1 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CNIH3Q8TBE1 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.08■□□□□ 0.48
CNIH3Q8TBE1 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.08■□□□□ 0.48
CNIH3Q8TBE1 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CNIH3Q8TBE1 AC008764.7-201ENST00000593779 1081 ntBASIC18.08■□□□□ 0.48
CNIH3Q8TBE1 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CNIH3Q8TBE1 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.08■□□□□ 0.48
CNIH3Q8TBE1 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CNIH3Q8TBE1 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CNIH3Q8TBE1 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.08■□□□□ 0.48
CNIH3Q8TBE1 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.08■□□□□ 0.48
CNIH3Q8TBE1 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.08■□□□□ 0.48
CNIH3Q8TBE1 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.08■□□□□ 0.48
CNIH3Q8TBE1 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CNIH3Q8TBE1 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.07■□□□□ 0.48
CNIH3Q8TBE1 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CNIH3Q8TBE1 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNIH3Q8TBE1 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.07■□□□□ 0.48
CNIH3Q8TBE1 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNIH3Q8TBE1 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNIH3Q8TBE1 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CNIH3Q8TBE1 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNIH3Q8TBE1 AC009113.1-201ENST00000570267 2443 ntBASIC18.07■□□□□ 0.48
CNIH3Q8TBE1 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNIH3Q8TBE1 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNIH3Q8TBE1 UNC93B3-201ENST00000308076 687 ntBASIC18.07■□□□□ 0.48
CNIH3Q8TBE1 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CNIH3Q8TBE1 AL136116.3-201ENST00000402907 1138 ntBASIC18.07■□□□□ 0.48
CNIH3Q8TBE1 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.07■□□□□ 0.48
CNIH3Q8TBE1 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.07■□□□□ 0.48
CNIH3Q8TBE1 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.07■□□□□ 0.48
CNIH3Q8TBE1 AC120498.10-201ENST00000621827 505 ntBASIC18.07■□□□□ 0.48
CNIH3Q8TBE1 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNIH3Q8TBE1 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CNIH3Q8TBE1 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CNIH3Q8TBE1 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNIH3Q8TBE1 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNIH3Q8TBE1 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNIH3Q8TBE1 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.07■□□□□ 0.48
CNIH3Q8TBE1 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms