Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 AC117947.1-201ENST00000427448 529 ntBASIC18.75■□□□□ 0.59
SNIP1Q8TAD8 KRT18P48-201ENST00000434763 852 ntBASIC18.75■□□□□ 0.59
SNIP1Q8TAD8 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.75■□□□□ 0.59
SNIP1Q8TAD8 AC009947.2-201ENST00000444014 672 ntBASIC18.75■□□□□ 0.59
SNIP1Q8TAD8 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.75■□□□□ 0.59
SNIP1Q8TAD8 AL445675.2-201ENST00000620291 557 ntBASIC18.75■□□□□ 0.59
SNIP1Q8TAD8 AP000550.4-202ENST00000639755 178 ntBASIC18.75■□□□□ 0.59
SNIP1Q8TAD8 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNIP1Q8TAD8 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNIP1Q8TAD8 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNIP1Q8TAD8 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SNIP1Q8TAD8 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNIP1Q8TAD8 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNIP1Q8TAD8 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNIP1Q8TAD8 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
SNIP1Q8TAD8 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SNIP1Q8TAD8 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNIP1Q8TAD8 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.74■□□□□ 0.59
SNIP1Q8TAD8 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SNIP1Q8TAD8 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNIP1Q8TAD8 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNIP1Q8TAD8 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.74■□□□□ 0.59
SNIP1Q8TAD8 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SNIP1Q8TAD8 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SNIP1Q8TAD8 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SNIP1Q8TAD8 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNIP1Q8TAD8 AL031133.1-201ENST00000406807 723 ntBASIC18.74■□□□□ 0.59
SNIP1Q8TAD8 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.74■□□□□ 0.59
SNIP1Q8TAD8 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.74■□□□□ 0.59
SNIP1Q8TAD8 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.74■□□□□ 0.59
SNIP1Q8TAD8 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SNIP1Q8TAD8 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.74■□□□□ 0.59
SNIP1Q8TAD8 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNIP1Q8TAD8 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNIP1Q8TAD8 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNIP1Q8TAD8 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNIP1Q8TAD8 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SNIP1Q8TAD8 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SNIP1Q8TAD8 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.74■□□□□ 0.59
SNIP1Q8TAD8 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.73■□□□□ 0.59
SNIP1Q8TAD8 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNIP1Q8TAD8 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SNIP1Q8TAD8 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.73■□□□□ 0.59
SNIP1Q8TAD8 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SNIP1Q8TAD8 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNIP1Q8TAD8 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.73■□□□□ 0.59
SNIP1Q8TAD8 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.73■□□□□ 0.59
SNIP1Q8TAD8 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.73■□□□□ 0.59
SNIP1Q8TAD8 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.73■□□□□ 0.59
SNIP1Q8TAD8 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.73■□□□□ 0.59
SNIP1Q8TAD8 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.73■□□□□ 0.59
SNIP1Q8TAD8 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.73■□□□□ 0.59
SNIP1Q8TAD8 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.73■□□□□ 0.59
SNIP1Q8TAD8 LINC00565-201ENST00000562710 2331 ntBASIC18.73■□□□□ 0.59
SNIP1Q8TAD8 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.73■□□□□ 0.59
SNIP1Q8TAD8 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.73■□□□□ 0.59
SNIP1Q8TAD8 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
SNIP1Q8TAD8 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
SNIP1Q8TAD8 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SNIP1Q8TAD8 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.72■□□□□ 0.59
SNIP1Q8TAD8 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.72■□□□□ 0.59
SNIP1Q8TAD8 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SNIP1Q8TAD8 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNIP1Q8TAD8 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SNIP1Q8TAD8 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNIP1Q8TAD8 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNIP1Q8TAD8 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNIP1Q8TAD8 RNF152P1-201ENST00000397754 604 ntBASIC18.72■□□□□ 0.59
SNIP1Q8TAD8 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.72■□□□□ 0.59
SNIP1Q8TAD8 HMGA1P5-201ENST00000412453 271 ntBASIC18.72■□□□□ 0.59
SNIP1Q8TAD8 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.72■□□□□ 0.59
SNIP1Q8TAD8 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.72■□□□□ 0.59
SNIP1Q8TAD8 B3GAT3P1-201ENST00000471720 806 ntBASIC18.72■□□□□ 0.59
SNIP1Q8TAD8 AC091390.4-202ENST00000476426 537 ntBASIC18.72■□□□□ 0.59
SNIP1Q8TAD8 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.72■□□□□ 0.59
SNIP1Q8TAD8 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.72■□□□□ 0.59
SNIP1Q8TAD8 KRT8P36-201ENST00000489121 1440 ntBASIC18.72■□□□□ 0.59
SNIP1Q8TAD8 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.72■□□□□ 0.59
SNIP1Q8TAD8 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNIP1Q8TAD8 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNIP1Q8TAD8 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNIP1Q8TAD8 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNIP1Q8TAD8 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.71■□□□□ 0.59
SNIP1Q8TAD8 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
SNIP1Q8TAD8 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SNIP1Q8TAD8 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNIP1Q8TAD8 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNIP1Q8TAD8 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNIP1Q8TAD8 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNIP1Q8TAD8 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNIP1Q8TAD8 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SNIP1Q8TAD8 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SNIP1Q8TAD8 HLA-G-202ENST00000376815 851 ntBASIC18.71■□□□□ 0.59
SNIP1Q8TAD8 HLA-G-203ENST00000376818 1127 ntBASIC18.71■□□□□ 0.59
SNIP1Q8TAD8 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.71■□□□□ 0.59
SNIP1Q8TAD8 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.71■□□□□ 0.59
SNIP1Q8TAD8 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.71■□□□□ 0.59
SNIP1Q8TAD8 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SNIP1Q8TAD8 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.71■□□□□ 0.59
SNIP1Q8TAD8 C1QL1P1-201ENST00000568105 661 ntBASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms