Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
DNAAF1Q8NEP3 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.42■□□□□ 0.38
DNAAF1Q8NEP3 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
DNAAF1Q8NEP3 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
DNAAF1Q8NEP3 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.42■□□□□ 0.38
DNAAF1Q8NEP3 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DNAAF1Q8NEP3 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DNAAF1Q8NEP3 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
DNAAF1Q8NEP3 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
DNAAF1Q8NEP3 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
DNAAF1Q8NEP3 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.41■□□□□ 0.38
DNAAF1Q8NEP3 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.41■□□□□ 0.38
DNAAF1Q8NEP3 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
DNAAF1Q8NEP3 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
DNAAF1Q8NEP3 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DNAAF1Q8NEP3 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DNAAF1Q8NEP3 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
DNAAF1Q8NEP3 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.41■□□□□ 0.38
DNAAF1Q8NEP3 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DNAAF1Q8NEP3 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DNAAF1Q8NEP3 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DNAAF1Q8NEP3 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DNAAF1Q8NEP3 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DNAAF1Q8NEP3 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
DNAAF1Q8NEP3 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.41■□□□□ 0.38
DNAAF1Q8NEP3 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
DNAAF1Q8NEP3 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
DNAAF1Q8NEP3 MYCNOS-205ENST00000641950 531 ntBASIC17.41■□□□□ 0.38
DNAAF1Q8NEP3 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
DNAAF1Q8NEP3 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DNAAF1Q8NEP3 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.41■□□□□ 0.38
DNAAF1Q8NEP3 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.41■□□□□ 0.38
DNAAF1Q8NEP3 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DNAAF1Q8NEP3 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DNAAF1Q8NEP3 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.41■□□□□ 0.38
DNAAF1Q8NEP3 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
DNAAF1Q8NEP3 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DNAAF1Q8NEP3 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
DNAAF1Q8NEP3 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DNAAF1Q8NEP3 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
DNAAF1Q8NEP3 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
DNAAF1Q8NEP3 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
DNAAF1Q8NEP3 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
DNAAF1Q8NEP3 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
DNAAF1Q8NEP3 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DNAAF1Q8NEP3 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC17.4■□□□□ 0.38
DNAAF1Q8NEP3 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
DNAAF1Q8NEP3 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
DNAAF1Q8NEP3 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.4■□□□□ 0.38
DNAAF1Q8NEP3 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
DNAAF1Q8NEP3 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.4■□□□□ 0.38
DNAAF1Q8NEP3 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
DNAAF1Q8NEP3 UBE2DNL-204ENST00000602536 740 ntBASIC17.4■□□□□ 0.38
DNAAF1Q8NEP3 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
DNAAF1Q8NEP3 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DNAAF1Q8NEP3 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DNAAF1Q8NEP3 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.4■□□□□ 0.38
DNAAF1Q8NEP3 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
DNAAF1Q8NEP3 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DNAAF1Q8NEP3 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
DNAAF1Q8NEP3 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
DNAAF1Q8NEP3 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DNAAF1Q8NEP3 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.4■□□□□ 0.38
DNAAF1Q8NEP3 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DNAAF1Q8NEP3 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DNAAF1Q8NEP3 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
DNAAF1Q8NEP3 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
DNAAF1Q8NEP3 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
DNAAF1Q8NEP3 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
DNAAF1Q8NEP3 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
DNAAF1Q8NEP3 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
DNAAF1Q8NEP3 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.39■□□□□ 0.37
DNAAF1Q8NEP3 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.39■□□□□ 0.37
DNAAF1Q8NEP3 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
DNAAF1Q8NEP3 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.39■□□□□ 0.37
DNAAF1Q8NEP3 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.39■□□□□ 0.37
DNAAF1Q8NEP3 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
DNAAF1Q8NEP3 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
DNAAF1Q8NEP3 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.39■□□□□ 0.37
DNAAF1Q8NEP3 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DNAAF1Q8NEP3 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DNAAF1Q8NEP3 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
DNAAF1Q8NEP3 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
DNAAF1Q8NEP3 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DNAAF1Q8NEP3 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.39■□□□□ 0.37
DNAAF1Q8NEP3 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DNAAF1Q8NEP3 PGM5P4-201ENST00000421970 445 ntBASIC17.39■□□□□ 0.37
DNAAF1Q8NEP3 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.39■□□□□ 0.37
DNAAF1Q8NEP3 KRT18P61-201ENST00000585825 1298 ntBASIC17.39■□□□□ 0.37
DNAAF1Q8NEP3 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.39■□□□□ 0.37
DNAAF1Q8NEP3 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
DNAAF1Q8NEP3 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.39■□□□□ 0.37
DNAAF1Q8NEP3 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
DNAAF1Q8NEP3 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
DNAAF1Q8NEP3 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.39■□□□□ 0.37
DNAAF1Q8NEP3 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
DNAAF1Q8NEP3 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
DNAAF1Q8NEP3 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
DNAAF1Q8NEP3 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.39■□□□□ 0.37
DNAAF1Q8NEP3 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms