Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SRFBP1Q8NEF9 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.94■□□□□ 0.62
SRFBP1Q8NEF9 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.94■□□□□ 0.62
SRFBP1Q8NEF9 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.94■□□□□ 0.62
SRFBP1Q8NEF9 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.94■□□□□ 0.62
SRFBP1Q8NEF9 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
SRFBP1Q8NEF9 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SRFBP1Q8NEF9 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SRFBP1Q8NEF9 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SRFBP1Q8NEF9 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.94■□□□□ 0.62
SRFBP1Q8NEF9 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
SRFBP1Q8NEF9 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SRFBP1Q8NEF9 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SRFBP1Q8NEF9 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SRFBP1Q8NEF9 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SRFBP1Q8NEF9 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SRFBP1Q8NEF9 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
SRFBP1Q8NEF9 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SRFBP1Q8NEF9 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SRFBP1Q8NEF9 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SRFBP1Q8NEF9 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.93■□□□□ 0.62
SRFBP1Q8NEF9 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SRFBP1Q8NEF9 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SRFBP1Q8NEF9 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
SRFBP1Q8NEF9 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SRFBP1Q8NEF9 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SRFBP1Q8NEF9 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SRFBP1Q8NEF9 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SRFBP1Q8NEF9 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.93■□□□□ 0.62
SRFBP1Q8NEF9 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.93■□□□□ 0.62
SRFBP1Q8NEF9 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.93■□□□□ 0.62
SRFBP1Q8NEF9 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.93■□□□□ 0.62
SRFBP1Q8NEF9 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.93■□□□□ 0.62
SRFBP1Q8NEF9 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SRFBP1Q8NEF9 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SRFBP1Q8NEF9 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SRFBP1Q8NEF9 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SRFBP1Q8NEF9 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SRFBP1Q8NEF9 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SRFBP1Q8NEF9 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SRFBP1Q8NEF9 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SRFBP1Q8NEF9 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SRFBP1Q8NEF9 TMEM179-206ENST00000616017 1645 ntBASIC18.92■□□□□ 0.62
SRFBP1Q8NEF9 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SRFBP1Q8NEF9 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SRFBP1Q8NEF9 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.92■□□□□ 0.62
SRFBP1Q8NEF9 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SRFBP1Q8NEF9 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SRFBP1Q8NEF9 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SRFBP1Q8NEF9 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.92■□□□□ 0.62
SRFBP1Q8NEF9 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SRFBP1Q8NEF9 AL691432.2-201ENST00000607222 2038 ntBASIC18.92■□□□□ 0.62
SRFBP1Q8NEF9 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SRFBP1Q8NEF9 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.92■□□□□ 0.62
SRFBP1Q8NEF9 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SRFBP1Q8NEF9 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.92■□□□□ 0.62
SRFBP1Q8NEF9 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.92■□□□□ 0.62
SRFBP1Q8NEF9 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.92■□□□□ 0.62
SRFBP1Q8NEF9 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SRFBP1Q8NEF9 AP001271.2-201ENST00000624018 1556 ntBASIC18.92■□□□□ 0.62
SRFBP1Q8NEF9 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SRFBP1Q8NEF9 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SRFBP1Q8NEF9 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.92■□□□□ 0.62
SRFBP1Q8NEF9 PHGDH-210ENST00000641115 1638 ntBASIC18.92■□□□□ 0.62
SRFBP1Q8NEF9 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SRFBP1Q8NEF9 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.92■□□□□ 0.62
SRFBP1Q8NEF9 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SRFBP1Q8NEF9 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SRFBP1Q8NEF9 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.91■□□□□ 0.62
SRFBP1Q8NEF9 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SRFBP1Q8NEF9 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SRFBP1Q8NEF9 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SRFBP1Q8NEF9 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SRFBP1Q8NEF9 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SRFBP1Q8NEF9 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.91■□□□□ 0.62
SRFBP1Q8NEF9 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SRFBP1Q8NEF9 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SRFBP1Q8NEF9 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SRFBP1Q8NEF9 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
SRFBP1Q8NEF9 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.91■□□□□ 0.62
SRFBP1Q8NEF9 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.91■□□□□ 0.62
SRFBP1Q8NEF9 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.91■□□□□ 0.62
SRFBP1Q8NEF9 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.91■□□□□ 0.62
SRFBP1Q8NEF9 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
SRFBP1Q8NEF9 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SRFBP1Q8NEF9 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.91■□□□□ 0.62
SRFBP1Q8NEF9 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SRFBP1Q8NEF9 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
SRFBP1Q8NEF9 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SRFBP1Q8NEF9 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SRFBP1Q8NEF9 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SRFBP1Q8NEF9 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SRFBP1Q8NEF9 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SRFBP1Q8NEF9 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
SRFBP1Q8NEF9 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
SRFBP1Q8NEF9 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SRFBP1Q8NEF9 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SRFBP1Q8NEF9 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SRFBP1Q8NEF9 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SRFBP1Q8NEF9 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms