Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
COL27A1Q8IZC6 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.83■□□□□ 0.6
COL27A1Q8IZC6 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL27A1Q8IZC6 AC096733.2-201ENST00000609937 1394 ntBASIC18.83■□□□□ 0.6
COL27A1Q8IZC6 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.6
COL27A1Q8IZC6 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL27A1Q8IZC6 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
COL27A1Q8IZC6 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL27A1Q8IZC6 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.82■□□□□ 0.6
COL27A1Q8IZC6 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.82■□□□□ 0.6
COL27A1Q8IZC6 EP400NL-214ENST00000641289 2402 ntBASIC18.82■□□□□ 0.6
COL27A1Q8IZC6 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL27A1Q8IZC6 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
COL27A1Q8IZC6 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.82■□□□□ 0.6
COL27A1Q8IZC6 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
COL27A1Q8IZC6 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.82■□□□□ 0.6
COL27A1Q8IZC6 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.82■□□□□ 0.6
COL27A1Q8IZC6 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL27A1Q8IZC6 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
COL27A1Q8IZC6 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
COL27A1Q8IZC6 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.82■□□□□ 0.6
COL27A1Q8IZC6 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL27A1Q8IZC6 AC012676.1-201ENST00000574705 1949 ntBASIC18.82■□□□□ 0.6
COL27A1Q8IZC6 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL27A1Q8IZC6 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL27A1Q8IZC6 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL27A1Q8IZC6 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.82■□□□□ 0.6
COL27A1Q8IZC6 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.82■□□□□ 0.6
COL27A1Q8IZC6 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.82■□□□□ 0.6
COL27A1Q8IZC6 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.82■□□□□ 0.6
COL27A1Q8IZC6 AC063952.2-201ENST00000498792 1227 ntBASIC18.82■□□□□ 0.6
COL27A1Q8IZC6 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.82■□□□□ 0.6
COL27A1Q8IZC6 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL27A1Q8IZC6 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
COL27A1Q8IZC6 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL27A1Q8IZC6 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL27A1Q8IZC6 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.81■□□□□ 0.6
COL27A1Q8IZC6 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.81■□□□□ 0.6
COL27A1Q8IZC6 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.81■□□□□ 0.6
COL27A1Q8IZC6 PHGDH-210ENST00000641115 1638 ntBASIC18.81■□□□□ 0.6
COL27A1Q8IZC6 AC006128.1-201ENST00000624704 1661 ntBASIC18.81■□□□□ 0.6
COL27A1Q8IZC6 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
COL27A1Q8IZC6 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COL27A1Q8IZC6 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL27A1Q8IZC6 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.81■□□□□ 0.6
COL27A1Q8IZC6 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL27A1Q8IZC6 AC117947.1-201ENST00000427448 529 ntBASIC18.81■□□□□ 0.6
COL27A1Q8IZC6 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.81■□□□□ 0.6
COL27A1Q8IZC6 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL27A1Q8IZC6 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL27A1Q8IZC6 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL27A1Q8IZC6 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL27A1Q8IZC6 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.8■□□□□ 0.6
COL27A1Q8IZC6 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL27A1Q8IZC6 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.8■□□□□ 0.6
COL27A1Q8IZC6 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL27A1Q8IZC6 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL27A1Q8IZC6 AK4P3-201ENST00000418260 669 ntBASIC18.8■□□□□ 0.6
COL27A1Q8IZC6 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
COL27A1Q8IZC6 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.8■□□□□ 0.6
COL27A1Q8IZC6 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL27A1Q8IZC6 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL27A1Q8IZC6 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL27A1Q8IZC6 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.8■□□□□ 0.6
COL27A1Q8IZC6 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL27A1Q8IZC6 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL27A1Q8IZC6 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL27A1Q8IZC6 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL27A1Q8IZC6 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL27A1Q8IZC6 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL27A1Q8IZC6 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.8■□□□□ 0.6
COL27A1Q8IZC6 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL27A1Q8IZC6 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.8■□□□□ 0.6
COL27A1Q8IZC6 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.8■□□□□ 0.6
COL27A1Q8IZC6 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
COL27A1Q8IZC6 FAM87A-204ENST00000613235 858 ntBASIC18.8■□□□□ 0.6
COL27A1Q8IZC6 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.8■□□□□ 0.6
COL27A1Q8IZC6 HLA-A-209ENST00000638375 975 ntBASIC18.8■□□□□ 0.6
COL27A1Q8IZC6 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.79■□□□□ 0.6
COL27A1Q8IZC6 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
COL27A1Q8IZC6 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.79■□□□□ 0.6
COL27A1Q8IZC6 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL27A1Q8IZC6 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL27A1Q8IZC6 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COL27A1Q8IZC6 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL27A1Q8IZC6 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL27A1Q8IZC6 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
COL27A1Q8IZC6 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.79■□□□□ 0.6
COL27A1Q8IZC6 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL27A1Q8IZC6 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.79■□□□□ 0.6
COL27A1Q8IZC6 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
COL27A1Q8IZC6 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COL27A1Q8IZC6 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL27A1Q8IZC6 FP700111.2-201ENST00000619190 1892 ntBASIC18.78■□□□□ 0.6
COL27A1Q8IZC6 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
COL27A1Q8IZC6 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.78■□□□□ 0.6
COL27A1Q8IZC6 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.78■□□□□ 0.6
COL27A1Q8IZC6 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL27A1Q8IZC6 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.78■□□□□ 0.6
COL27A1Q8IZC6 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms