Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.3■■□□□ 1
CCDC170Q8IYT3 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.3■■□□□ 1
CCDC170Q8IYT3 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.3■■□□□ 1
CCDC170Q8IYT3 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC170Q8IYT3 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.3■■□□□ 1
CCDC170Q8IYT3 AC100791.3-201ENST00000617619 330 ntBASIC21.3■■□□□ 1
CCDC170Q8IYT3 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC170Q8IYT3 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.3■■□□□ 1
CCDC170Q8IYT3 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CCDC170Q8IYT3 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
CCDC170Q8IYT3 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
CCDC170Q8IYT3 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC170Q8IYT3 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC170Q8IYT3 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC21.3■■□□□ 1
CCDC170Q8IYT3 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC170Q8IYT3 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC170Q8IYT3 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC21.29■■□□□ 1
CCDC170Q8IYT3 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC170Q8IYT3 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC170Q8IYT3 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
CCDC170Q8IYT3 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
CCDC170Q8IYT3 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC170Q8IYT3 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC170Q8IYT3 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
CCDC170Q8IYT3 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC170Q8IYT3 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.29■■□□□ 1
CCDC170Q8IYT3 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC170Q8IYT3 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.29■■□□□ 1
CCDC170Q8IYT3 AC016405.3-201ENST00000607710 860 ntBASIC21.29■■□□□ 1
CCDC170Q8IYT3 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC21.29■■□□□ 1
CCDC170Q8IYT3 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.29■■□□□ 1
CCDC170Q8IYT3 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC170Q8IYT3 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.29■■□□□ 1
CCDC170Q8IYT3 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CCDC170Q8IYT3 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC21.28■■□□□ 1
CCDC170Q8IYT3 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCDC170Q8IYT3 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
CCDC170Q8IYT3 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CCDC170Q8IYT3 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC170Q8IYT3 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC170Q8IYT3 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC170Q8IYT3 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC170Q8IYT3 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC170Q8IYT3 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC170Q8IYT3 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCDC170Q8IYT3 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC170Q8IYT3 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.28■■□□□ 1
CCDC170Q8IYT3 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.28■■□□□ 1
CCDC170Q8IYT3 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCDC170Q8IYT3 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC170Q8IYT3 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC170Q8IYT3 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC21.28■■□□□ 1
CCDC170Q8IYT3 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC170Q8IYT3 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCDC170Q8IYT3 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC170Q8IYT3 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCDC170Q8IYT3 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.27■■□□□ 1
CCDC170Q8IYT3 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC170Q8IYT3 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC170Q8IYT3 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC170Q8IYT3 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC170Q8IYT3 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC170Q8IYT3 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCDC170Q8IYT3 MIR638-201ENST00000385237 100 ntBASIC21.27■■□□□ 1
CCDC170Q8IYT3 MCRIP2P1-201ENST00000394346 511 ntBASIC21.27■■□□□ 1
CCDC170Q8IYT3 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCDC170Q8IYT3 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
CCDC170Q8IYT3 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC170Q8IYT3 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.27■■□□□ 1
CCDC170Q8IYT3 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.27■■□□□ 1
CCDC170Q8IYT3 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.27■■□□□ 1
CCDC170Q8IYT3 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC170Q8IYT3 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.27■■□□□ 1
CCDC170Q8IYT3 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.27■■□□□ 1
CCDC170Q8IYT3 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCDC170Q8IYT3 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC21.27■□□□□ 0.99
CCDC170Q8IYT3 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CCDC170Q8IYT3 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
CCDC170Q8IYT3 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC170Q8IYT3 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC170Q8IYT3 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
CCDC170Q8IYT3 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC170Q8IYT3 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC170Q8IYT3 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC21.26■□□□□ 0.99
CCDC170Q8IYT3 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC21.26■□□□□ 0.99
CCDC170Q8IYT3 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC170Q8IYT3 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC170Q8IYT3 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC170Q8IYT3 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.26■□□□□ 0.99
CCDC170Q8IYT3 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.26■□□□□ 0.99
CCDC170Q8IYT3 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
CCDC170Q8IYT3 AC013268.1-206ENST00000638368 961 ntBASIC21.26■□□□□ 0.99
CCDC170Q8IYT3 AC112229.1-201ENST00000639295 961 ntBASIC21.26■□□□□ 0.99
CCDC170Q8IYT3 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC170Q8IYT3 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC21.26■□□□□ 0.99
CCDC170Q8IYT3 AC093503.3-201ENST00000624917 2352 ntBASIC21.26■□□□□ 0.99
CCDC170Q8IYT3 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC170Q8IYT3 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CCDC170Q8IYT3 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC170Q8IYT3 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms