Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
DHX40Q8IX18 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
DHX40Q8IX18 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
DHX40Q8IX18 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC22.07■■□□□ 1.12
DHX40Q8IX18 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
DHX40Q8IX18 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
DHX40Q8IX18 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
DHX40Q8IX18 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
DHX40Q8IX18 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
DHX40Q8IX18 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC22.06■■□□□ 1.12
DHX40Q8IX18 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
DHX40Q8IX18 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
DHX40Q8IX18 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
DHX40Q8IX18 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
DHX40Q8IX18 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
DHX40Q8IX18 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
DHX40Q8IX18 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
DHX40Q8IX18 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC22.06■■□□□ 1.12
DHX40Q8IX18 GXYLT1P2-201ENST00000433312 1230 ntBASIC22.06■■□□□ 1.12
DHX40Q8IX18 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC22.06■■□□□ 1.12
DHX40Q8IX18 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
DHX40Q8IX18 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC22.06■■□□□ 1.12
DHX40Q8IX18 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
DHX40Q8IX18 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
DHX40Q8IX18 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC22.06■■□□□ 1.12
DHX40Q8IX18 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
DHX40Q8IX18 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC22.06■■□□□ 1.12
DHX40Q8IX18 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
DHX40Q8IX18 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
DHX40Q8IX18 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
DHX40Q8IX18 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
DHX40Q8IX18 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC22.05■■□□□ 1.12
DHX40Q8IX18 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
DHX40Q8IX18 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC22.05■■□□□ 1.12
DHX40Q8IX18 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC22.05■■□□□ 1.12
DHX40Q8IX18 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC22.05■■□□□ 1.12
DHX40Q8IX18 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC22.05■■□□□ 1.12
DHX40Q8IX18 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
DHX40Q8IX18 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
DHX40Q8IX18 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
DHX40Q8IX18 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
DHX40Q8IX18 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
DHX40Q8IX18 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
DHX40Q8IX18 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC22.04■■□□□ 1.12
DHX40Q8IX18 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
DHX40Q8IX18 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
DHX40Q8IX18 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
DHX40Q8IX18 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC22.04■■□□□ 1.12
DHX40Q8IX18 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC22.04■■□□□ 1.12
DHX40Q8IX18 MYCNOS-205ENST00000641950 531 ntBASIC22.04■■□□□ 1.12
DHX40Q8IX18 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
DHX40Q8IX18 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
DHX40Q8IX18 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
DHX40Q8IX18 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC22.04■■□□□ 1.12
DHX40Q8IX18 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
DHX40Q8IX18 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
DHX40Q8IX18 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
DHX40Q8IX18 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC22.03■■□□□ 1.12
DHX40Q8IX18 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
DHX40Q8IX18 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
DHX40Q8IX18 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
DHX40Q8IX18 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
DHX40Q8IX18 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
DHX40Q8IX18 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
DHX40Q8IX18 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
DHX40Q8IX18 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC22.03■■□□□ 1.12
DHX40Q8IX18 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
DHX40Q8IX18 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC22.03■■□□□ 1.12
DHX40Q8IX18 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
DHX40Q8IX18 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
DHX40Q8IX18 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
DHX40Q8IX18 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
DHX40Q8IX18 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
DHX40Q8IX18 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
DHX40Q8IX18 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC22.02■■□□□ 1.12
DHX40Q8IX18 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
DHX40Q8IX18 LINC01465-201ENST00000408887 1940 ntBASIC22.02■■□□□ 1.12
DHX40Q8IX18 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC22.02■■□□□ 1.12
DHX40Q8IX18 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
DHX40Q8IX18 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC22.02■■□□□ 1.12
DHX40Q8IX18 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
DHX40Q8IX18 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
DHX40Q8IX18 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
DHX40Q8IX18 AC016405.3-201ENST00000607710 860 ntBASIC22.02■■□□□ 1.12
DHX40Q8IX18 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
DHX40Q8IX18 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
DHX40Q8IX18 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
DHX40Q8IX18 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
DHX40Q8IX18 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.11
DHX40Q8IX18 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.11
DHX40Q8IX18 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
DHX40Q8IX18 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC22.01■■□□□ 1.11
DHX40Q8IX18 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
DHX40Q8IX18 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
DHX40Q8IX18 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
DHX40Q8IX18 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC22.01■■□□□ 1.11
DHX40Q8IX18 AP001271.2-201ENST00000624018 1556 ntBASIC22.01■■□□□ 1.11
DHX40Q8IX18 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
DHX40Q8IX18 AL591742.1-201ENST00000604433 565 ntBASIC22.01■■□□□ 1.11
DHX40Q8IX18 AL137784.2-201ENST00000607332 1000 ntBASIC22.01■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms