Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM48Q8IWZ4 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
TRIM48Q8IWZ4 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.46■□□□□ 0.71
TRIM48Q8IWZ4 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM48Q8IWZ4 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM48Q8IWZ4 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM48Q8IWZ4 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.46■□□□□ 0.71
TRIM48Q8IWZ4 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM48Q8IWZ4 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
TRIM48Q8IWZ4 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.46■□□□□ 0.71
TRIM48Q8IWZ4 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.46■□□□□ 0.71
TRIM48Q8IWZ4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.46■□□□□ 0.71
TRIM48Q8IWZ4 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
TRIM48Q8IWZ4 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.46■□□□□ 0.71
TRIM48Q8IWZ4 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.46■□□□□ 0.71
TRIM48Q8IWZ4 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM48Q8IWZ4 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.46■□□□□ 0.71
TRIM48Q8IWZ4 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.46■□□□□ 0.71
TRIM48Q8IWZ4 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
TRIM48Q8IWZ4 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.46■□□□□ 0.71
TRIM48Q8IWZ4 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
TRIM48Q8IWZ4 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM48Q8IWZ4 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM48Q8IWZ4 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.45■□□□□ 0.7
TRIM48Q8IWZ4 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM48Q8IWZ4 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM48Q8IWZ4 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM48Q8IWZ4 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.45■□□□□ 0.7
TRIM48Q8IWZ4 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.45■□□□□ 0.7
TRIM48Q8IWZ4 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM48Q8IWZ4 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM48Q8IWZ4 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM48Q8IWZ4 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.45■□□□□ 0.7
TRIM48Q8IWZ4 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.45■□□□□ 0.7
TRIM48Q8IWZ4 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
TRIM48Q8IWZ4 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.45■□□□□ 0.7
TRIM48Q8IWZ4 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
TRIM48Q8IWZ4 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.45■□□□□ 0.7
TRIM48Q8IWZ4 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.45■□□□□ 0.7
TRIM48Q8IWZ4 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.45■□□□□ 0.7
TRIM48Q8IWZ4 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.45■□□□□ 0.7
TRIM48Q8IWZ4 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.45■□□□□ 0.7
TRIM48Q8IWZ4 AL121906.2-201ENST00000621597 723 ntBASIC19.45■□□□□ 0.7
TRIM48Q8IWZ4 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.45■□□□□ 0.7
TRIM48Q8IWZ4 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM48Q8IWZ4 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM48Q8IWZ4 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
TRIM48Q8IWZ4 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.45■□□□□ 0.7
TRIM48Q8IWZ4 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TRIM48Q8IWZ4 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM48Q8IWZ4 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM48Q8IWZ4 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TRIM48Q8IWZ4 AC124283.5-201ENST00000624661 1809 ntBASIC19.44■□□□□ 0.7
TRIM48Q8IWZ4 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM48Q8IWZ4 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM48Q8IWZ4 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM48Q8IWZ4 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM48Q8IWZ4 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM48Q8IWZ4 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
TRIM48Q8IWZ4 KRASP1-201ENST00000407852 552 ntBASIC19.44■□□□□ 0.7
TRIM48Q8IWZ4 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.44■□□□□ 0.7
TRIM48Q8IWZ4 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.44■□□□□ 0.7
TRIM48Q8IWZ4 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.44■□□□□ 0.7
TRIM48Q8IWZ4 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.44■□□□□ 0.7
TRIM48Q8IWZ4 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.44■□□□□ 0.7
TRIM48Q8IWZ4 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM48Q8IWZ4 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.44■□□□□ 0.7
TRIM48Q8IWZ4 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.44■□□□□ 0.7
TRIM48Q8IWZ4 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.44■□□□□ 0.7
TRIM48Q8IWZ4 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
TRIM48Q8IWZ4 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM48Q8IWZ4 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
TRIM48Q8IWZ4 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.44■□□□□ 0.7
TRIM48Q8IWZ4 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM48Q8IWZ4 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM48Q8IWZ4 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM48Q8IWZ4 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.43■□□□□ 0.7
TRIM48Q8IWZ4 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
TRIM48Q8IWZ4 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.43■□□□□ 0.7
TRIM48Q8IWZ4 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM48Q8IWZ4 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TRIM48Q8IWZ4 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.43■□□□□ 0.7
TRIM48Q8IWZ4 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.43■□□□□ 0.7
TRIM48Q8IWZ4 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM48Q8IWZ4 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.43■□□□□ 0.7
TRIM48Q8IWZ4 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM48Q8IWZ4 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TRIM48Q8IWZ4 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.43■□□□□ 0.7
TRIM48Q8IWZ4 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM48Q8IWZ4 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM48Q8IWZ4 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM48Q8IWZ4 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM48Q8IWZ4 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM48Q8IWZ4 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM48Q8IWZ4 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM48Q8IWZ4 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TRIM48Q8IWZ4 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.42■□□□□ 0.7
TRIM48Q8IWZ4 AL121829.2-201ENST00000620908 328 ntBASIC19.42■□□□□ 0.7
TRIM48Q8IWZ4 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM48Q8IWZ4 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms