Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 AC011484.1-201ENST00000377652 1995 ntBASIC17.97■□□□□ 0.47
CROCCP3Q8IVE0 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CROCCP3Q8IVE0 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CROCCP3Q8IVE0 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CROCCP3Q8IVE0 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CROCCP3Q8IVE0 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
CROCCP3Q8IVE0 MIR3181-201ENST00000578512 73 ntBASIC17.97■□□□□ 0.47
CROCCP3Q8IVE0 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC17.97■□□□□ 0.47
CROCCP3Q8IVE0 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CROCCP3Q8IVE0 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CROCCP3Q8IVE0 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CROCCP3Q8IVE0 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CROCCP3Q8IVE0 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.97■□□□□ 0.47
CROCCP3Q8IVE0 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CROCCP3Q8IVE0 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CROCCP3Q8IVE0 AC012313.1-201ENST00000593393 3059 ntBASIC17.97■□□□□ 0.47
CROCCP3Q8IVE0 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CROCCP3Q8IVE0 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CROCCP3Q8IVE0 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CROCCP3Q8IVE0 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CROCCP3Q8IVE0 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CROCCP3Q8IVE0 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CROCCP3Q8IVE0 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CROCCP3Q8IVE0 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CROCCP3Q8IVE0 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CROCCP3Q8IVE0 AC106820.2-201ENST00000563775 3264 ntBASIC17.96■□□□□ 0.47
CROCCP3Q8IVE0 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.96■□□□□ 0.47
CROCCP3Q8IVE0 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CROCCP3Q8IVE0 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CROCCP3Q8IVE0 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
CROCCP3Q8IVE0 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC17.96■□□□□ 0.47
CROCCP3Q8IVE0 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CROCCP3Q8IVE0 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CROCCP3Q8IVE0 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.96■□□□□ 0.47
CROCCP3Q8IVE0 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CROCCP3Q8IVE0 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CROCCP3Q8IVE0 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CROCCP3Q8IVE0 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CROCCP3Q8IVE0 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CROCCP3Q8IVE0 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CROCCP3Q8IVE0 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
CROCCP3Q8IVE0 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.96■□□□□ 0.46
CROCCP3Q8IVE0 AC099398.1-201ENST00000567919 2776 ntBASIC17.96■□□□□ 0.46
CROCCP3Q8IVE0 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.96■□□□□ 0.46
CROCCP3Q8IVE0 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CROCCP3Q8IVE0 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CROCCP3Q8IVE0 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CROCCP3Q8IVE0 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
CROCCP3Q8IVE0 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
CROCCP3Q8IVE0 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
CROCCP3Q8IVE0 RNF146-205ENST00000477776 762 ntTSL 3 BASIC17.95■□□□□ 0.46
CROCCP3Q8IVE0 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.95■□□□□ 0.46
CROCCP3Q8IVE0 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CROCCP3Q8IVE0 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CROCCP3Q8IVE0 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CROCCP3Q8IVE0 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CROCCP3Q8IVE0 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CROCCP3Q8IVE0 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CROCCP3Q8IVE0 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.95■□□□□ 0.46
CROCCP3Q8IVE0 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CROCCP3Q8IVE0 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CROCCP3Q8IVE0 AC090164.3-201ENST00000610780 2143 ntBASIC17.95■□□□□ 0.46
CROCCP3Q8IVE0 HTR7P1-202ENST00000624664 4411 ntBASIC17.95■□□□□ 0.46
CROCCP3Q8IVE0 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.94■□□□□ 0.46
CROCCP3Q8IVE0 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CROCCP3Q8IVE0 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.94■□□□□ 0.46
CROCCP3Q8IVE0 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CROCCP3Q8IVE0 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CROCCP3Q8IVE0 LSM4-201ENST00000252816 986 ntTSL 2 BASIC17.94■□□□□ 0.46
CROCCP3Q8IVE0 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.94■□□□□ 0.46
CROCCP3Q8IVE0 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CROCCP3Q8IVE0 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CROCCP3Q8IVE0 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC17.94■□□□□ 0.46
CROCCP3Q8IVE0 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC17.94■□□□□ 0.46
CROCCP3Q8IVE0 AP005435.1-201ENST00000529293 1178 ntBASIC17.94■□□□□ 0.46
CROCCP3Q8IVE0 AC099791.2-201ENST00000605725 427 ntBASIC17.94■□□□□ 0.46
CROCCP3Q8IVE0 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CROCCP3Q8IVE0 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CROCCP3Q8IVE0 AL354751.1-201ENST00000412768 1863 ntBASIC17.94■□□□□ 0.46
CROCCP3Q8IVE0 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.94■□□□□ 0.46
CROCCP3Q8IVE0 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
CROCCP3Q8IVE0 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CROCCP3Q8IVE0 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CROCCP3Q8IVE0 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CROCCP3Q8IVE0 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CROCCP3Q8IVE0 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CROCCP3Q8IVE0 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CROCCP3Q8IVE0 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CROCCP3Q8IVE0 PRTG-204ENST00000561292 833 ntTSL 3 BASIC17.93■□□□□ 0.46
CROCCP3Q8IVE0 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.93■□□□□ 0.46
CROCCP3Q8IVE0 MIR4787-201ENST00000607364 84 ntBASIC17.93■□□□□ 0.46
CROCCP3Q8IVE0 AC092171.4-201ENST00000609130 632 ntBASIC17.93■□□□□ 0.46
CROCCP3Q8IVE0 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CROCCP3Q8IVE0 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CROCCP3Q8IVE0 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.93■□□□□ 0.46
CROCCP3Q8IVE0 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CROCCP3Q8IVE0 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CROCCP3Q8IVE0 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.93■□□□□ 0.46
CROCCP3Q8IVE0 BICD1-207ENST00000551848 1962 ntBASIC17.93■□□□□ 0.46
CROCCP3Q8IVE0 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms