Protein–RNA interactions for Protein: Q86UP3

ZFHX4, Zinc finger homeobox protein 4, humanhuman

Predictions only

Length 3,567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFHX4Q86UP3 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZFHX4Q86UP3 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.72■□□□□ 0.59
ZFHX4Q86UP3 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.72■□□□□ 0.59
ZFHX4Q86UP3 AC092119.3-201ENST00000612618 583 ntBASIC18.72■□□□□ 0.59
ZFHX4Q86UP3 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZFHX4Q86UP3 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZFHX4Q86UP3 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZFHX4Q86UP3 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZFHX4Q86UP3 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZFHX4Q86UP3 PGM5P4-201ENST00000421970 445 ntBASIC18.72■□□□□ 0.59
ZFHX4Q86UP3 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZFHX4Q86UP3 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZFHX4Q86UP3 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ZFHX4Q86UP3 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.72■□□□□ 0.59
ZFHX4Q86UP3 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZFHX4Q86UP3 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZFHX4Q86UP3 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ZFHX4Q86UP3 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
ZFHX4Q86UP3 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.71■□□□□ 0.59
ZFHX4Q86UP3 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ZFHX4Q86UP3 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.71■□□□□ 0.59
ZFHX4Q86UP3 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZFHX4Q86UP3 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.71■□□□□ 0.59
ZFHX4Q86UP3 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ZFHX4Q86UP3 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.71■□□□□ 0.59
ZFHX4Q86UP3 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZFHX4Q86UP3 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
ZFHX4Q86UP3 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
ZFHX4Q86UP3 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZFHX4Q86UP3 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZFHX4Q86UP3 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.71■□□□□ 0.59
ZFHX4Q86UP3 PMS2P1-201ENST00000431037 1228 ntBASIC18.71■□□□□ 0.59
ZFHX4Q86UP3 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.71■□□□□ 0.59
ZFHX4Q86UP3 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.71■□□□□ 0.59
ZFHX4Q86UP3 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
ZFHX4Q86UP3 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ZFHX4Q86UP3 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
ZFHX4Q86UP3 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.7■□□□□ 0.58
ZFHX4Q86UP3 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZFHX4Q86UP3 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZFHX4Q86UP3 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZFHX4Q86UP3 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZFHX4Q86UP3 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZFHX4Q86UP3 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ZFHX4Q86UP3 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.7■□□□□ 0.58
ZFHX4Q86UP3 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.7■□□□□ 0.58
ZFHX4Q86UP3 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.7■□□□□ 0.58
ZFHX4Q86UP3 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZFHX4Q86UP3 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
ZFHX4Q86UP3 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZFHX4Q86UP3 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
ZFHX4Q86UP3 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZFHX4Q86UP3 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZFHX4Q86UP3 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.7■□□□□ 0.58
ZFHX4Q86UP3 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ZFHX4Q86UP3 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ZFHX4Q86UP3 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.7■□□□□ 0.58
ZFHX4Q86UP3 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.7■□□□□ 0.58
ZFHX4Q86UP3 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ZFHX4Q86UP3 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZFHX4Q86UP3 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ZFHX4Q86UP3 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.69■□□□□ 0.58
ZFHX4Q86UP3 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ZFHX4Q86UP3 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.69■□□□□ 0.58
ZFHX4Q86UP3 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZFHX4Q86UP3 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZFHX4Q86UP3 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZFHX4Q86UP3 EMBP1-201ENST00000458200 901 ntBASIC18.69■□□□□ 0.58
ZFHX4Q86UP3 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZFHX4Q86UP3 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.69■□□□□ 0.58
ZFHX4Q86UP3 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZFHX4Q86UP3 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ZFHX4Q86UP3 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZFHX4Q86UP3 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZFHX4Q86UP3 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.69■□□□□ 0.58
ZFHX4Q86UP3 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.69■□□□□ 0.58
ZFHX4Q86UP3 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ZFHX4Q86UP3 CR392000.1-201ENST00000624770 1228 ntBASIC18.69■□□□□ 0.58
ZFHX4Q86UP3 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZFHX4Q86UP3 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZFHX4Q86UP3 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZFHX4Q86UP3 MIR1233-2-201ENST00000408138 82 ntBASIC18.68■□□□□ 0.58
ZFHX4Q86UP3 MIR1233-1-201ENST00000408722 82 ntBASIC18.68■□□□□ 0.58
ZFHX4Q86UP3 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZFHX4Q86UP3 EGLN1P1-201ENST00000531623 762 ntBASIC18.68■□□□□ 0.58
ZFHX4Q86UP3 PRELID1P1-202ENST00000567272 903 ntBASIC18.68■□□□□ 0.58
ZFHX4Q86UP3 AP005242.2-201ENST00000580065 1175 ntBASIC18.68■□□□□ 0.58
ZFHX4Q86UP3 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.68■□□□□ 0.58
ZFHX4Q86UP3 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZFHX4Q86UP3 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
ZFHX4Q86UP3 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZFHX4Q86UP3 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZFHX4Q86UP3 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.68■□□□□ 0.58
ZFHX4Q86UP3 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.68■□□□□ 0.58
ZFHX4Q86UP3 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.68■□□□□ 0.58
ZFHX4Q86UP3 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZFHX4Q86UP3 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZFHX4Q86UP3 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.68■□□□□ 0.58
ZFHX4Q86UP3 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZFHX4Q86UP3 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms