Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC12.76□□□□□ -0.37
MRPL55Q7Z7F7 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
MRPL55Q7Z7F7 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
MRPL55Q7Z7F7 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
MRPL55Q7Z7F7 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MRPL55Q7Z7F7 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MRPL55Q7Z7F7 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
MRPL55Q7Z7F7 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MRPL55Q7Z7F7 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC12.76□□□□□ -0.37
MRPL55Q7Z7F7 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
MRPL55Q7Z7F7 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
MRPL55Q7Z7F7 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MRPL55Q7Z7F7 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MRPL55Q7Z7F7 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
MRPL55Q7Z7F7 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
MRPL55Q7Z7F7 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MRPL55Q7Z7F7 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
MRPL55Q7Z7F7 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
MRPL55Q7Z7F7 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC12.75□□□□□ -0.37
MRPL55Q7Z7F7 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC12.75□□□□□ -0.37
MRPL55Q7Z7F7 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
MRPL55Q7Z7F7 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MRPL55Q7Z7F7 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC12.75□□□□□ -0.37
MRPL55Q7Z7F7 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
MRPL55Q7Z7F7 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
MRPL55Q7Z7F7 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
MRPL55Q7Z7F7 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC12.75□□□□□ -0.37
MRPL55Q7Z7F7 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC12.75□□□□□ -0.37
MRPL55Q7Z7F7 AC087623.3-201ENST00000607047 1098 ntBASIC12.75□□□□□ -0.37
MRPL55Q7Z7F7 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MRPL55Q7Z7F7 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MRPL55Q7Z7F7 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
MRPL55Q7Z7F7 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC12.74□□□□□ -0.37
MRPL55Q7Z7F7 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC12.74□□□□□ -0.37
MRPL55Q7Z7F7 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MRPL55Q7Z7F7 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC12.74□□□□□ -0.37
MRPL55Q7Z7F7 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC12.74□□□□□ -0.37
MRPL55Q7Z7F7 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MRPL55Q7Z7F7 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MRPL55Q7Z7F7 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC12.74□□□□□ -0.37
MRPL55Q7Z7F7 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
MRPL55Q7Z7F7 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MRPL55Q7Z7F7 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
MRPL55Q7Z7F7 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
MRPL55Q7Z7F7 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MRPL55Q7Z7F7 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
MRPL55Q7Z7F7 HSCB-202ENST00000398941 955 ntTSL 2 BASIC12.74□□□□□ -0.37
MRPL55Q7Z7F7 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
MRPL55Q7Z7F7 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC12.74□□□□□ -0.37
MRPL55Q7Z7F7 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC12.74□□□□□ -0.37
MRPL55Q7Z7F7 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
MRPL55Q7Z7F7 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
MRPL55Q7Z7F7 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
MRPL55Q7Z7F7 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
MRPL55Q7Z7F7 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
MRPL55Q7Z7F7 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
MRPL55Q7Z7F7 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
MRPL55Q7Z7F7 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC12.74□□□□□ -0.37
MRPL55Q7Z7F7 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
MRPL55Q7Z7F7 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MRPL55Q7Z7F7 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
MRPL55Q7Z7F7 STK25-205ENST00000405883 1904 ntTSL 2 BASIC12.74□□□□□ -0.37
MRPL55Q7Z7F7 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
MRPL55Q7Z7F7 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
MRPL55Q7Z7F7 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MRPL55Q7Z7F7 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MRPL55Q7Z7F7 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC12.73□□□□□ -0.37
MRPL55Q7Z7F7 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC12.73□□□□□ -0.37
MRPL55Q7Z7F7 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
MRPL55Q7Z7F7 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
MRPL55Q7Z7F7 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC12.73□□□□□ -0.37
MRPL55Q7Z7F7 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
MRPL55Q7Z7F7 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC12.73□□□□□ -0.37
MRPL55Q7Z7F7 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
MRPL55Q7Z7F7 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC12.73□□□□□ -0.37
MRPL55Q7Z7F7 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC12.73□□□□□ -0.37
MRPL55Q7Z7F7 HR-201ENST00000312841 5351 ntTSL 5 BASIC12.73□□□□□ -0.37
MRPL55Q7Z7F7 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
MRPL55Q7Z7F7 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC12.73□□□□□ -0.37
MRPL55Q7Z7F7 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC12.73□□□□□ -0.37
MRPL55Q7Z7F7 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC12.73□□□□□ -0.37
MRPL55Q7Z7F7 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC12.73□□□□□ -0.37
MRPL55Q7Z7F7 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC12.73□□□□□ -0.37
MRPL55Q7Z7F7 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC12.73□□□□□ -0.37
MRPL55Q7Z7F7 WWOX-218ENST00000627394 894 ntTSL 5 BASIC12.73□□□□□ -0.37
MRPL55Q7Z7F7 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
MRPL55Q7Z7F7 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
MRPL55Q7Z7F7 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
MRPL55Q7Z7F7 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
MRPL55Q7Z7F7 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
MRPL55Q7Z7F7 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
MRPL55Q7Z7F7 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
MRPL55Q7Z7F7 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
MRPL55Q7Z7F7 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
MRPL55Q7Z7F7 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC12.73□□□□□ -0.37
MRPL55Q7Z7F7 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC12.73□□□□□ -0.37
MRPL55Q7Z7F7 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
MRPL55Q7Z7F7 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
MRPL55Q7Z7F7 BX119927.1-201ENST00000636596 1552 ntBASIC12.73□□□□□ -0.37
MRPL55Q7Z7F7 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms