Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.42■□□□□ 0.38
HIST2H3AQ71DI3 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
HIST2H3AQ71DI3 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HIST2H3AQ71DI3 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HIST2H3AQ71DI3 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HIST2H3AQ71DI3 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HIST2H3AQ71DI3 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.42■□□□□ 0.38
HIST2H3AQ71DI3 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.42■□□□□ 0.38
HIST2H3AQ71DI3 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HIST2H3AQ71DI3 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HIST2H3AQ71DI3 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HIST2H3AQ71DI3 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIST2H3AQ71DI3 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.41■□□□□ 0.38
HIST2H3AQ71DI3 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.41■□□□□ 0.38
HIST2H3AQ71DI3 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.41■□□□□ 0.38
HIST2H3AQ71DI3 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIST2H3AQ71DI3 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
HIST2H3AQ71DI3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIST2H3AQ71DI3 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIST2H3AQ71DI3 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIST2H3AQ71DI3 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HIST2H3AQ71DI3 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIST2H3AQ71DI3 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HIST2H3AQ71DI3 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.41■□□□□ 0.38
HIST2H3AQ71DI3 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.41■□□□□ 0.38
HIST2H3AQ71DI3 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HIST2H3AQ71DI3 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HIST2H3AQ71DI3 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.41■□□□□ 0.38
HIST2H3AQ71DI3 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
HIST2H3AQ71DI3 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.41■□□□□ 0.38
HIST2H3AQ71DI3 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HIST2H3AQ71DI3 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
HIST2H3AQ71DI3 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
HIST2H3AQ71DI3 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIST2H3AQ71DI3 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.41■□□□□ 0.38
HIST2H3AQ71DI3 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
HIST2H3AQ71DI3 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
HIST2H3AQ71DI3 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIST2H3AQ71DI3 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.41■□□□□ 0.38
HIST2H3AQ71DI3 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
HIST2H3AQ71DI3 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.41■□□□□ 0.38
HIST2H3AQ71DI3 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
HIST2H3AQ71DI3 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HIST2H3AQ71DI3 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HIST2H3AQ71DI3 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HIST2H3AQ71DI3 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HIST2H3AQ71DI3 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HIST2H3AQ71DI3 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.4■□□□□ 0.38
HIST2H3AQ71DI3 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HIST2H3AQ71DI3 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.4■□□□□ 0.38
HIST2H3AQ71DI3 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HIST2H3AQ71DI3 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HIST2H3AQ71DI3 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HIST2H3AQ71DI3 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HIST2H3AQ71DI3 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HIST2H3AQ71DI3 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HIST2H3AQ71DI3 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HIST2H3AQ71DI3 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.4■□□□□ 0.38
HIST2H3AQ71DI3 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HIST2H3AQ71DI3 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
HIST2H3AQ71DI3 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.4■□□□□ 0.38
HIST2H3AQ71DI3 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.4■□□□□ 0.38
HIST2H3AQ71DI3 AC092666.2-201ENST00000613287 246 ntBASIC17.4■□□□□ 0.38
HIST2H3AQ71DI3 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.4■□□□□ 0.38
HIST2H3AQ71DI3 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HIST2H3AQ71DI3 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HIST2H3AQ71DI3 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HIST2H3AQ71DI3 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.4■□□□□ 0.38
HIST2H3AQ71DI3 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
HIST2H3AQ71DI3 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HIST2H3AQ71DI3 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
HIST2H3AQ71DI3 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HIST2H3AQ71DI3 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.4■□□□□ 0.38
HIST2H3AQ71DI3 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
HIST2H3AQ71DI3 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
HIST2H3AQ71DI3 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HIST2H3AQ71DI3 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.39■□□□□ 0.37
HIST2H3AQ71DI3 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
HIST2H3AQ71DI3 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.39■□□□□ 0.37
HIST2H3AQ71DI3 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HIST2H3AQ71DI3 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
HIST2H3AQ71DI3 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HIST2H3AQ71DI3 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HIST2H3AQ71DI3 SLC29A4P1-201ENST00000398760 971 ntBASIC17.39■□□□□ 0.37
HIST2H3AQ71DI3 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HIST2H3AQ71DI3 DUSP5P2-201ENST00000426873 1033 ntBASIC17.39■□□□□ 0.37
HIST2H3AQ71DI3 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.39■□□□□ 0.37
HIST2H3AQ71DI3 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.39■□□□□ 0.37
HIST2H3AQ71DI3 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.39■□□□□ 0.37
HIST2H3AQ71DI3 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.39■□□□□ 0.37
HIST2H3AQ71DI3 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.39■□□□□ 0.37
HIST2H3AQ71DI3 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.39■□□□□ 0.37
HIST2H3AQ71DI3 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.39■□□□□ 0.37
HIST2H3AQ71DI3 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
HIST2H3AQ71DI3 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HIST2H3AQ71DI3 AP001271.2-201ENST00000624018 1556 ntBASIC17.39■□□□□ 0.37
HIST2H3AQ71DI3 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HIST2H3AQ71DI3 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HIST2H3AQ71DI3 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
HIST2H3AQ71DI3 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms