Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.57■□□□□ 0.56
RTL4Q6ZR62 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTL4Q6ZR62 AC006058.3-201ENST00000606217 1069 ntBASIC18.57■□□□□ 0.56
RTL4Q6ZR62 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTL4Q6ZR62 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTL4Q6ZR62 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTL4Q6ZR62 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTL4Q6ZR62 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTL4Q6ZR62 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTL4Q6ZR62 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTL4Q6ZR62 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTL4Q6ZR62 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTL4Q6ZR62 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.57■□□□□ 0.56
RTL4Q6ZR62 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTL4Q6ZR62 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTL4Q6ZR62 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTL4Q6ZR62 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTL4Q6ZR62 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.56■□□□□ 0.56
RTL4Q6ZR62 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RTL4Q6ZR62 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RTL4Q6ZR62 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RTL4Q6ZR62 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.56■□□□□ 0.56
RTL4Q6ZR62 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RTL4Q6ZR62 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RTL4Q6ZR62 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.56■□□□□ 0.56
RTL4Q6ZR62 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RTL4Q6ZR62 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RTL4Q6ZR62 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.56■□□□□ 0.56
RTL4Q6ZR62 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RTL4Q6ZR62 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RTL4Q6ZR62 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
RTL4Q6ZR62 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RTL4Q6ZR62 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.56■□□□□ 0.56
RTL4Q6ZR62 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RTL4Q6ZR62 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.56■□□□□ 0.56
RTL4Q6ZR62 AL162377.1-201ENST00000618844 1793 ntBASIC18.55■□□□□ 0.56
RTL4Q6ZR62 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
RTL4Q6ZR62 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RTL4Q6ZR62 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTL4Q6ZR62 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.55■□□□□ 0.56
RTL4Q6ZR62 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTL4Q6ZR62 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.55■□□□□ 0.56
RTL4Q6ZR62 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RTL4Q6ZR62 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTL4Q6ZR62 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTL4Q6ZR62 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTL4Q6ZR62 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
RTL4Q6ZR62 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.55■□□□□ 0.56
RTL4Q6ZR62 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RTL4Q6ZR62 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTL4Q6ZR62 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
RTL4Q6ZR62 AL390719.1-204ENST00000412397 1219 ntBASIC18.55■□□□□ 0.56
RTL4Q6ZR62 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RTL4Q6ZR62 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTL4Q6ZR62 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.55■□□□□ 0.56
RTL4Q6ZR62 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RTL4Q6ZR62 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.55■□□□□ 0.56
RTL4Q6ZR62 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.55■□□□□ 0.56
RTL4Q6ZR62 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.55■□□□□ 0.56
RTL4Q6ZR62 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.55■□□□□ 0.56
RTL4Q6ZR62 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.55■□□□□ 0.56
RTL4Q6ZR62 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTL4Q6ZR62 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTL4Q6ZR62 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.55■□□□□ 0.56
RTL4Q6ZR62 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTL4Q6ZR62 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
RTL4Q6ZR62 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.54■□□□□ 0.56
RTL4Q6ZR62 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTL4Q6ZR62 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTL4Q6ZR62 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTL4Q6ZR62 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.54■□□□□ 0.56
RTL4Q6ZR62 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RTL4Q6ZR62 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
RTL4Q6ZR62 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTL4Q6ZR62 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTL4Q6ZR62 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
RTL4Q6ZR62 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.54■□□□□ 0.56
RTL4Q6ZR62 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
RTL4Q6ZR62 AC008403.3-201ENST00000598924 454 ntBASIC18.54■□□□□ 0.56
RTL4Q6ZR62 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTL4Q6ZR62 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.54■□□□□ 0.56
RTL4Q6ZR62 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RTL4Q6ZR62 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.54■□□□□ 0.56
RTL4Q6ZR62 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
RTL4Q6ZR62 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.54■□□□□ 0.56
RTL4Q6ZR62 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTL4Q6ZR62 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTL4Q6ZR62 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RTL4Q6ZR62 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTL4Q6ZR62 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTL4Q6ZR62 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.53■□□□□ 0.56
RTL4Q6ZR62 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RTL4Q6ZR62 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTL4Q6ZR62 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTL4Q6ZR62 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RTL4Q6ZR62 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.53■□□□□ 0.56
RTL4Q6ZR62 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RTL4Q6ZR62 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTL4Q6ZR62 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.53■□□□□ 0.56
RTL4Q6ZR62 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms