Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 STK25-205ENST00000405883 1904 ntTSL 2 BASIC14.98□□□□□ -0.01
MRPL54Q6P161 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
MRPL54Q6P161 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
MRPL54Q6P161 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
MRPL54Q6P161 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC14.98□□□□□ -0.01
MRPL54Q6P161 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
MRPL54Q6P161 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC14.98□□□□□ -0.01
MRPL54Q6P161 NTF6A-201ENST00000591175 560 ntBASIC14.98□□□□□ -0.01
MRPL54Q6P161 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC14.98□□□□□ -0.01
MRPL54Q6P161 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MRPL54Q6P161 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MRPL54Q6P161 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
MRPL54Q6P161 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
MRPL54Q6P161 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
MRPL54Q6P161 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC14.98□□□□□ -0.01
MRPL54Q6P161 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MRPL54Q6P161 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
MRPL54Q6P161 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
MRPL54Q6P161 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MRPL54Q6P161 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC14.97□□□□□ -0.01
MRPL54Q6P161 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
MRPL54Q6P161 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
MRPL54Q6P161 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MRPL54Q6P161 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC14.97□□□□□ -0.01
MRPL54Q6P161 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
MRPL54Q6P161 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC14.97□□□□□ -0.01
MRPL54Q6P161 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MRPL54Q6P161 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
MRPL54Q6P161 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MRPL54Q6P161 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC14.97□□□□□ -0.01
MRPL54Q6P161 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MRPL54Q6P161 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
MRPL54Q6P161 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC14.97□□□□□ -0.01
MRPL54Q6P161 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
MRPL54Q6P161 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
MRPL54Q6P161 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MRPL54Q6P161 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
MRPL54Q6P161 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
MRPL54Q6P161 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC14.97□□□□□ -0.01
MRPL54Q6P161 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC14.97□□□□□ -0.01
MRPL54Q6P161 AL032819.2-201ENST00000624543 2162 ntBASIC14.97□□□□□ -0.01
MRPL54Q6P161 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MRPL54Q6P161 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MRPL54Q6P161 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
MRPL54Q6P161 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
MRPL54Q6P161 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.01
MRPL54Q6P161 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
MRPL54Q6P161 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC14.96□□□□□ -0.01
MRPL54Q6P161 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
MRPL54Q6P161 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
MRPL54Q6P161 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MRPL54Q6P161 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC14.96□□□□□ -0.01
MRPL54Q6P161 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC14.96□□□□□ -0.01
MRPL54Q6P161 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MRPL54Q6P161 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
MRPL54Q6P161 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
MRPL54Q6P161 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
MRPL54Q6P161 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
MRPL54Q6P161 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC14.96□□□□□ -0.01
MRPL54Q6P161 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
MRPL54Q6P161 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
MRPL54Q6P161 AC010997.5-201ENST00000609182 354 ntBASIC14.96□□□□□ -0.01
MRPL54Q6P161 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
MRPL54Q6P161 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
MRPL54Q6P161 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MRPL54Q6P161 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
MRPL54Q6P161 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
MRPL54Q6P161 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC14.96□□□□□ -0.01
MRPL54Q6P161 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
MRPL54Q6P161 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MRPL54Q6P161 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
MRPL54Q6P161 AL133373.2-201ENST00000623187 2828 ntBASIC14.96□□□□□ -0.02
MRPL54Q6P161 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
MRPL54Q6P161 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC14.96□□□□□ -0.02
MRPL54Q6P161 PXK-203ENST00000383715 1756 ntTSL 5 BASIC14.96□□□□□ -0.02
MRPL54Q6P161 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
MRPL54Q6P161 STK25-204ENST00000405585 1643 ntTSL 2 BASIC14.95□□□□□ -0.02
MRPL54Q6P161 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
MRPL54Q6P161 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC14.95□□□□□ -0.02
MRPL54Q6P161 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
MRPL54Q6P161 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
MRPL54Q6P161 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
MRPL54Q6P161 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
MRPL54Q6P161 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
MRPL54Q6P161 AL390961.4-201ENST00000623958 2535 ntBASIC14.95□□□□□ -0.02
MRPL54Q6P161 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
MRPL54Q6P161 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
MRPL54Q6P161 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
MRPL54Q6P161 TSPY13P-201ENST00000338964 914 ntBASIC14.95□□□□□ -0.02
MRPL54Q6P161 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC14.95□□□□□ -0.02
MRPL54Q6P161 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC14.95□□□□□ -0.02
MRPL54Q6P161 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC14.95□□□□□ -0.02
MRPL54Q6P161 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC14.95□□□□□ -0.02
MRPL54Q6P161 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
MRPL54Q6P161 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
MRPL54Q6P161 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
MRPL54Q6P161 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
MRPL54Q6P161 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC14.95□□□□□ -0.02
MRPL54Q6P161 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
MRPL54Q6P161 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms