Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF43Q68DV7 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF43Q68DV7 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
RNF43Q68DV7 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
RNF43Q68DV7 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF43Q68DV7 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.8■□□□□ 0.92
RNF43Q68DV7 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
RNF43Q68DV7 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.79■□□□□ 0.92
RNF43Q68DV7 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF43Q68DV7 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF43Q68DV7 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF43Q68DV7 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF43Q68DV7 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF43Q68DV7 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RNF43Q68DV7 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF43Q68DV7 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.79■□□□□ 0.92
RNF43Q68DV7 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.79■□□□□ 0.92
RNF43Q68DV7 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF43Q68DV7 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF43Q68DV7 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
RNF43Q68DV7 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF43Q68DV7 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.79■□□□□ 0.92
RNF43Q68DV7 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.79■□□□□ 0.92
RNF43Q68DV7 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.79■□□□□ 0.92
RNF43Q68DV7 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.79■□□□□ 0.92
RNF43Q68DV7 AC005829.2-201ENST00000571422 1056 ntBASIC20.79■□□□□ 0.92
RNF43Q68DV7 AC010331.1-201ENST00000611423 582 ntBASIC20.79■□□□□ 0.92
RNF43Q68DV7 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF43Q68DV7 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF43Q68DV7 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.78■□□□□ 0.92
RNF43Q68DV7 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RNF43Q68DV7 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RNF43Q68DV7 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF43Q68DV7 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF43Q68DV7 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF43Q68DV7 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF43Q68DV7 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF43Q68DV7 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
RNF43Q68DV7 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF43Q68DV7 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF43Q68DV7 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF43Q68DV7 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.78■□□□□ 0.92
RNF43Q68DV7 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.78■□□□□ 0.92
RNF43Q68DV7 SOX15-203ENST00000570788 1093 ntBASIC20.78■□□□□ 0.92
RNF43Q68DV7 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RNF43Q68DV7 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.78■□□□□ 0.92
RNF43Q68DV7 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.78■□□□□ 0.92
RNF43Q68DV7 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.78■□□□□ 0.92
RNF43Q68DV7 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RNF43Q68DV7 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF43Q68DV7 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF43Q68DV7 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.78■□□□□ 0.92
RNF43Q68DV7 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
RNF43Q68DV7 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF43Q68DV7 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF43Q68DV7 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF43Q68DV7 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF43Q68DV7 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.77■□□□□ 0.92
RNF43Q68DV7 AC211429.1-201ENST00000415277 523 ntBASIC20.77■□□□□ 0.92
RNF43Q68DV7 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.77■□□□□ 0.92
RNF43Q68DV7 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF43Q68DV7 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF43Q68DV7 REXO1L12P-201ENST00000622156 912 ntBASIC20.77■□□□□ 0.92
RNF43Q68DV7 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF43Q68DV7 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.77■□□□□ 0.92
RNF43Q68DV7 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF43Q68DV7 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF43Q68DV7 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF43Q68DV7 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF43Q68DV7 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF43Q68DV7 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF43Q68DV7 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RNF43Q68DV7 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
RNF43Q68DV7 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RNF43Q68DV7 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF43Q68DV7 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF43Q68DV7 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RNF43Q68DV7 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF43Q68DV7 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF43Q68DV7 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF43Q68DV7 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF43Q68DV7 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF43Q68DV7 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF43Q68DV7 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.76■□□□□ 0.91
RNF43Q68DV7 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RNF43Q68DV7 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.76■□□□□ 0.91
RNF43Q68DV7 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.76■□□□□ 0.91
RNF43Q68DV7 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.76■□□□□ 0.91
RNF43Q68DV7 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.76■□□□□ 0.91
RNF43Q68DV7 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.76■□□□□ 0.91
RNF43Q68DV7 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
RNF43Q68DV7 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RNF43Q68DV7 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF43Q68DV7 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF43Q68DV7 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF43Q68DV7 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF43Q68DV7 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RNF43Q68DV7 AC087289.5-201ENST00000586076 3175 ntBASIC20.76■□□□□ 0.91
RNF43Q68DV7 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.76■□□□□ 0.91
RNF43Q68DV7 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms