Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
LYSMD4Q5XG99 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LYSMD4Q5XG99 AL121603.2-201ENST00000557373 2117 ntBASIC19.54■□□□□ 0.72
LYSMD4Q5XG99 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LYSMD4Q5XG99 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LYSMD4Q5XG99 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.54■□□□□ 0.72
LYSMD4Q5XG99 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LYSMD4Q5XG99 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.54■□□□□ 0.72
LYSMD4Q5XG99 KRT18P16-201ENST00000510337 1294 ntBASIC19.54■□□□□ 0.72
LYSMD4Q5XG99 AC022616.7-201ENST00000525383 220 ntBASIC19.54■□□□□ 0.72
LYSMD4Q5XG99 SLC25A1P4-201ENST00000567977 778 ntBASIC19.54■□□□□ 0.72
LYSMD4Q5XG99 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.54■□□□□ 0.72
LYSMD4Q5XG99 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
LYSMD4Q5XG99 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LYSMD4Q5XG99 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LYSMD4Q5XG99 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LYSMD4Q5XG99 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LYSMD4Q5XG99 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LYSMD4Q5XG99 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
LYSMD4Q5XG99 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LYSMD4Q5XG99 KRT16P6-202ENST00000425692 1426 ntBASIC19.53■□□□□ 0.72
LYSMD4Q5XG99 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LYSMD4Q5XG99 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LYSMD4Q5XG99 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.53■□□□□ 0.72
LYSMD4Q5XG99 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LYSMD4Q5XG99 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LYSMD4Q5XG99 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LYSMD4Q5XG99 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LYSMD4Q5XG99 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.53■□□□□ 0.72
LYSMD4Q5XG99 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LYSMD4Q5XG99 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.53■□□□□ 0.72
LYSMD4Q5XG99 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.53■□□□□ 0.72
LYSMD4Q5XG99 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LYSMD4Q5XG99 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.53■□□□□ 0.72
LYSMD4Q5XG99 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LYSMD4Q5XG99 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LYSMD4Q5XG99 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LYSMD4Q5XG99 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LYSMD4Q5XG99 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LYSMD4Q5XG99 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
LYSMD4Q5XG99 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LYSMD4Q5XG99 TFP1-202ENST00000475455 1573 ntBASIC19.53■□□□□ 0.72
LYSMD4Q5XG99 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
LYSMD4Q5XG99 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.52■□□□□ 0.72
LYSMD4Q5XG99 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
LYSMD4Q5XG99 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LYSMD4Q5XG99 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LYSMD4Q5XG99 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.52■□□□□ 0.72
LYSMD4Q5XG99 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LYSMD4Q5XG99 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
LYSMD4Q5XG99 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LYSMD4Q5XG99 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
LYSMD4Q5XG99 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.52■□□□□ 0.72
LYSMD4Q5XG99 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LYSMD4Q5XG99 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
LYSMD4Q5XG99 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LYSMD4Q5XG99 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LYSMD4Q5XG99 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.52■□□□□ 0.72
LYSMD4Q5XG99 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
LYSMD4Q5XG99 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.52■□□□□ 0.72
LYSMD4Q5XG99 AC091076.1-201ENST00000610741 619 ntBASIC19.52■□□□□ 0.72
LYSMD4Q5XG99 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.52■□□□□ 0.72
LYSMD4Q5XG99 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
LYSMD4Q5XG99 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LYSMD4Q5XG99 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LYSMD4Q5XG99 FBXW4P1-201ENST00000426721 2239 ntBASIC19.52■□□□□ 0.71
LYSMD4Q5XG99 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
LYSMD4Q5XG99 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.52■□□□□ 0.71
LYSMD4Q5XG99 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
LYSMD4Q5XG99 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LYSMD4Q5XG99 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LYSMD4Q5XG99 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
LYSMD4Q5XG99 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.51■□□□□ 0.71
LYSMD4Q5XG99 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
LYSMD4Q5XG99 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.51■□□□□ 0.71
LYSMD4Q5XG99 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.51■□□□□ 0.71
LYSMD4Q5XG99 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.51■□□□□ 0.71
LYSMD4Q5XG99 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.51■□□□□ 0.71
LYSMD4Q5XG99 INGX-201ENST00000359239 846 ntBASIC19.51■□□□□ 0.71
LYSMD4Q5XG99 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.51■□□□□ 0.71
LYSMD4Q5XG99 HMGA1P5-201ENST00000412453 271 ntBASIC19.51■□□□□ 0.71
LYSMD4Q5XG99 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LYSMD4Q5XG99 UPK3BP1-201ENST00000428678 509 ntBASIC19.51■□□□□ 0.71
LYSMD4Q5XG99 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.51■□□□□ 0.71
LYSMD4Q5XG99 AC063952.2-201ENST00000498792 1227 ntBASIC19.51■□□□□ 0.71
LYSMD4Q5XG99 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
LYSMD4Q5XG99 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
LYSMD4Q5XG99 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LYSMD4Q5XG99 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LYSMD4Q5XG99 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LYSMD4Q5XG99 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LYSMD4Q5XG99 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LYSMD4Q5XG99 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LYSMD4Q5XG99 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LYSMD4Q5XG99 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LYSMD4Q5XG99 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LYSMD4Q5XG99 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
LYSMD4Q5XG99 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LYSMD4Q5XG99 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LYSMD4Q5XG99 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms