Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.55■■□□□ 1.2
COL13A1Q5TAT6 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
COL13A1Q5TAT6 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
COL13A1Q5TAT6 HBZP1-201ENST00000354915 429 ntBASIC22.55■■□□□ 1.2
COL13A1Q5TAT6 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL13A1Q5TAT6 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
COL13A1Q5TAT6 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC22.55■■□□□ 1.2
COL13A1Q5TAT6 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC22.55■■□□□ 1.2
COL13A1Q5TAT6 RNPS1P1-201ENST00000507437 918 ntBASIC22.55■■□□□ 1.2
COL13A1Q5TAT6 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC22.55■■□□□ 1.2
COL13A1Q5TAT6 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
COL13A1Q5TAT6 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL13A1Q5TAT6 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
COL13A1Q5TAT6 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL13A1Q5TAT6 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.54■■□□□ 1.2
COL13A1Q5TAT6 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL13A1Q5TAT6 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
COL13A1Q5TAT6 DFFB-203ENST00000341385 572 ntTSL 5 BASIC22.54■■□□□ 1.2
COL13A1Q5TAT6 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC22.54■■□□□ 1.2
COL13A1Q5TAT6 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
COL13A1Q5TAT6 AP000867.3-201ENST00000524675 377 ntBASIC22.54■■□□□ 1.2
COL13A1Q5TAT6 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC22.54■■□□□ 1.2
COL13A1Q5TAT6 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL13A1Q5TAT6 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL13A1Q5TAT6 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
COL13A1Q5TAT6 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC22.53■■□□□ 1.2
COL13A1Q5TAT6 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL13A1Q5TAT6 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL13A1Q5TAT6 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL13A1Q5TAT6 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL13A1Q5TAT6 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL13A1Q5TAT6 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC22.53■■□□□ 1.2
COL13A1Q5TAT6 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC22.53■■□□□ 1.2
COL13A1Q5TAT6 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC22.53■■□□□ 1.2
COL13A1Q5TAT6 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC22.53■■□□□ 1.2
COL13A1Q5TAT6 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
COL13A1Q5TAT6 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
COL13A1Q5TAT6 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL13A1Q5TAT6 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
COL13A1Q5TAT6 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL13A1Q5TAT6 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
COL13A1Q5TAT6 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC22.52■■□□□ 1.2
COL13A1Q5TAT6 AC142381.3-201ENST00000568208 1670 ntBASIC22.52■■□□□ 1.2
COL13A1Q5TAT6 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
COL13A1Q5TAT6 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
COL13A1Q5TAT6 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC22.52■■□□□ 1.2
COL13A1Q5TAT6 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC22.52■■□□□ 1.2
COL13A1Q5TAT6 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
COL13A1Q5TAT6 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
COL13A1Q5TAT6 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
COL13A1Q5TAT6 UPF3AP3-201ENST00000420996 769 ntBASIC22.52■■□□□ 1.2
COL13A1Q5TAT6 PHB2-202ENST00000440277 996 ntTSL 5 BASIC22.52■■□□□ 1.2
COL13A1Q5TAT6 COX20P2-201ENST00000452636 358 ntBASIC22.52■■□□□ 1.2
COL13A1Q5TAT6 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC22.52■■□□□ 1.2
COL13A1Q5TAT6 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
COL13A1Q5TAT6 AL353801.3-201ENST00000609898 542 ntBASIC22.52■■□□□ 1.2
COL13A1Q5TAT6 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
COL13A1Q5TAT6 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC22.52■■□□□ 1.2
COL13A1Q5TAT6 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.19
COL13A1Q5TAT6 CREM-210ENST00000374721 2020 ntTSL 5 BASIC22.52■■□□□ 1.19
COL13A1Q5TAT6 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.19
COL13A1Q5TAT6 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC22.51■■□□□ 1.19
COL13A1Q5TAT6 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
COL13A1Q5TAT6 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL13A1Q5TAT6 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.51■■□□□ 1.19
COL13A1Q5TAT6 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC22.51■■□□□ 1.19
COL13A1Q5TAT6 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL13A1Q5TAT6 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL13A1Q5TAT6 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
COL13A1Q5TAT6 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC22.51■■□□□ 1.19
COL13A1Q5TAT6 MOK-208ENST00000519058 917 ntTSL 2 BASIC22.51■■□□□ 1.19
COL13A1Q5TAT6 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
COL13A1Q5TAT6 AC064862.7-201ENST00000604520 867 ntBASIC22.51■■□□□ 1.19
COL13A1Q5TAT6 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL13A1Q5TAT6 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
COL13A1Q5TAT6 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC22.51■■□□□ 1.19
COL13A1Q5TAT6 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
COL13A1Q5TAT6 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
COL13A1Q5TAT6 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
COL13A1Q5TAT6 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
COL13A1Q5TAT6 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL13A1Q5TAT6 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC22.5■■□□□ 1.19
COL13A1Q5TAT6 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
COL13A1Q5TAT6 AC022211.4-201ENST00000625094 2161 ntBASIC22.5■■□□□ 1.19
COL13A1Q5TAT6 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL13A1Q5TAT6 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
COL13A1Q5TAT6 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL13A1Q5TAT6 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC22.5■■□□□ 1.19
COL13A1Q5TAT6 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
COL13A1Q5TAT6 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC22.5■■□□□ 1.19
COL13A1Q5TAT6 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL13A1Q5TAT6 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL13A1Q5TAT6 TPM1-218ENST00000559281 851 ntTSL 5 BASIC22.5■■□□□ 1.19
COL13A1Q5TAT6 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC22.5■■□□□ 1.19
COL13A1Q5TAT6 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC22.5■■□□□ 1.19
COL13A1Q5TAT6 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC22.5■■□□□ 1.19
COL13A1Q5TAT6 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL13A1Q5TAT6 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC22.5■■□□□ 1.19
COL13A1Q5TAT6 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.49■■□□□ 1.19
COL13A1Q5TAT6 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms