Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
SNAPC4Q5SXM2 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC32.69■■■□□ 2.82
SNAPC4Q5SXM2 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC32.69■■■□□ 2.82
SNAPC4Q5SXM2 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC32.69■■■□□ 2.82
SNAPC4Q5SXM2 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC32.69■■■□□ 2.82
SNAPC4Q5SXM2 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
SNAPC4Q5SXM2 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
SNAPC4Q5SXM2 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC32.68■■■□□ 2.82
SNAPC4Q5SXM2 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
SNAPC4Q5SXM2 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC32.68■■■□□ 2.82
SNAPC4Q5SXM2 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC32.68■■■□□ 2.82
SNAPC4Q5SXM2 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC32.68■■■□□ 2.82
SNAPC4Q5SXM2 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC32.68■■■□□ 2.82
SNAPC4Q5SXM2 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC32.68■■■□□ 2.82
SNAPC4Q5SXM2 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC32.68■■■□□ 2.82
SNAPC4Q5SXM2 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
SNAPC4Q5SXM2 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
SNAPC4Q5SXM2 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
SNAPC4Q5SXM2 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC32.68■■■□□ 2.82
SNAPC4Q5SXM2 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC32.68■■■□□ 2.82
SNAPC4Q5SXM2 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC32.68■■■□□ 2.82
SNAPC4Q5SXM2 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
SNAPC4Q5SXM2 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC32.67■■■□□ 2.82
SNAPC4Q5SXM2 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
SNAPC4Q5SXM2 DAP-202ENST00000432074 1048 ntTSL 2 BASIC32.67■■■□□ 2.82
SNAPC4Q5SXM2 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC32.67■■■□□ 2.82
SNAPC4Q5SXM2 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC32.67■■■□□ 2.82
SNAPC4Q5SXM2 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC32.67■■■□□ 2.82
SNAPC4Q5SXM2 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC32.67■■■□□ 2.82
SNAPC4Q5SXM2 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC32.67■■■□□ 2.82
SNAPC4Q5SXM2 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC32.67■■■□□ 2.82
SNAPC4Q5SXM2 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC32.67■■■□□ 2.82
SNAPC4Q5SXM2 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC32.66■■■□□ 2.82
SNAPC4Q5SXM2 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
SNAPC4Q5SXM2 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC32.66■■■□□ 2.82
SNAPC4Q5SXM2 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
SNAPC4Q5SXM2 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
SNAPC4Q5SXM2 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
SNAPC4Q5SXM2 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
SNAPC4Q5SXM2 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
SNAPC4Q5SXM2 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC32.66■■■□□ 2.82
SNAPC4Q5SXM2 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
SNAPC4Q5SXM2 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
SNAPC4Q5SXM2 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
SNAPC4Q5SXM2 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
SNAPC4Q5SXM2 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC32.65■■■□□ 2.82
SNAPC4Q5SXM2 AL023803.3-201ENST00000615559 522 ntBASIC32.65■■■□□ 2.82
SNAPC4Q5SXM2 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
SNAPC4Q5SXM2 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC32.65■■■□□ 2.82
SNAPC4Q5SXM2 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC32.65■■■□□ 2.82
SNAPC4Q5SXM2 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC32.65■■■□□ 2.82
SNAPC4Q5SXM2 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC32.64■■■□□ 2.82
SNAPC4Q5SXM2 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC32.64■■■□□ 2.82
SNAPC4Q5SXM2 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
SNAPC4Q5SXM2 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
SNAPC4Q5SXM2 AP000347.1-202ENST00000435868 847 ntBASIC32.64■■■□□ 2.82
SNAPC4Q5SXM2 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC32.64■■■□□ 2.82
SNAPC4Q5SXM2 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC32.64■■■□□ 2.82
SNAPC4Q5SXM2 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC32.64■■■□□ 2.82
SNAPC4Q5SXM2 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC32.64■■■□□ 2.82
SNAPC4Q5SXM2 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC32.64■■■□□ 2.82
SNAPC4Q5SXM2 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
SNAPC4Q5SXM2 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
SNAPC4Q5SXM2 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.81
SNAPC4Q5SXM2 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
SNAPC4Q5SXM2 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
SNAPC4Q5SXM2 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC32.63■■■□□ 2.81
SNAPC4Q5SXM2 AC004951.3-201ENST00000418645 1148 ntBASIC32.63■■■□□ 2.81
SNAPC4Q5SXM2 PTPA-216ENST00000432651 857 ntTSL 2 BASIC32.63■■■□□ 2.81
SNAPC4Q5SXM2 GXYLT1P6-201ENST00000456472 1187 ntBASIC32.63■■■□□ 2.81
SNAPC4Q5SXM2 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC32.63■■■□□ 2.81
SNAPC4Q5SXM2 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
SNAPC4Q5SXM2 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
SNAPC4Q5SXM2 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC32.63■■■□□ 2.81
SNAPC4Q5SXM2 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC32.63■■■□□ 2.81
SNAPC4Q5SXM2 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
SNAPC4Q5SXM2 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC32.63■■■□□ 2.81
SNAPC4Q5SXM2 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC32.63■■■□□ 2.81
SNAPC4Q5SXM2 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
SNAPC4Q5SXM2 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
SNAPC4Q5SXM2 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC32.62■■■□□ 2.81
SNAPC4Q5SXM2 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC32.62■■■□□ 2.81
SNAPC4Q5SXM2 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC32.62■■■□□ 2.81
SNAPC4Q5SXM2 HLA-A-209ENST00000638375 975 ntBASIC32.62■■■□□ 2.81
SNAPC4Q5SXM2 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC32.62■■■□□ 2.81
SNAPC4Q5SXM2 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC32.62■■■□□ 2.81
SNAPC4Q5SXM2 AC242852.2-201ENST00000615738 1807 ntBASIC32.62■■■□□ 2.81
SNAPC4Q5SXM2 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC32.62■■■□□ 2.81
SNAPC4Q5SXM2 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC32.62■■■□□ 2.81
SNAPC4Q5SXM2 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC32.61■■■□□ 2.81
SNAPC4Q5SXM2 VENTXP5-201ENST00000523979 775 ntBASIC32.61■■■□□ 2.81
SNAPC4Q5SXM2 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC32.61■■■□□ 2.81
SNAPC4Q5SXM2 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC32.61■■■□□ 2.81
SNAPC4Q5SXM2 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC32.61■■■□□ 2.81
SNAPC4Q5SXM2 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
SNAPC4Q5SXM2 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
SNAPC4Q5SXM2 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
SNAPC4Q5SXM2 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
SNAPC4Q5SXM2 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC32.61■■■□□ 2.81
SNAPC4Q5SXM2 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms