Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RUNDC3AQ59EK9 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RUNDC3AQ59EK9 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.73■□□□□ 0.59
RUNDC3AQ59EK9 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
RUNDC3AQ59EK9 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.73■□□□□ 0.59
RUNDC3AQ59EK9 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RUNDC3AQ59EK9 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RUNDC3AQ59EK9 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RUNDC3AQ59EK9 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.73■□□□□ 0.59
RUNDC3AQ59EK9 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RUNDC3AQ59EK9 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RUNDC3AQ59EK9 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.73■□□□□ 0.59
RUNDC3AQ59EK9 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
RUNDC3AQ59EK9 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RUNDC3AQ59EK9 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RUNDC3AQ59EK9 KRT8P20-201ENST00000423953 1409 ntBASIC18.73■□□□□ 0.59
RUNDC3AQ59EK9 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RUNDC3AQ59EK9 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.73■□□□□ 0.59
RUNDC3AQ59EK9 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RUNDC3AQ59EK9 AP001271.2-201ENST00000624018 1556 ntBASIC18.72■□□□□ 0.59
RUNDC3AQ59EK9 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.72■□□□□ 0.59
RUNDC3AQ59EK9 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RUNDC3AQ59EK9 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RUNDC3AQ59EK9 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RUNDC3AQ59EK9 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RUNDC3AQ59EK9 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RUNDC3AQ59EK9 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RUNDC3AQ59EK9 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RUNDC3AQ59EK9 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.72■□□□□ 0.59
RUNDC3AQ59EK9 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RUNDC3AQ59EK9 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RUNDC3AQ59EK9 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
RUNDC3AQ59EK9 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RUNDC3AQ59EK9 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RUNDC3AQ59EK9 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.72■□□□□ 0.59
RUNDC3AQ59EK9 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RUNDC3AQ59EK9 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RUNDC3AQ59EK9 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.72■□□□□ 0.59
RUNDC3AQ59EK9 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RUNDC3AQ59EK9 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RUNDC3AQ59EK9 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RUNDC3AQ59EK9 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RUNDC3AQ59EK9 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RUNDC3AQ59EK9 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RUNDC3AQ59EK9 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RUNDC3AQ59EK9 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RUNDC3AQ59EK9 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RUNDC3AQ59EK9 MCRIP2P1-201ENST00000394346 511 ntBASIC18.71■□□□□ 0.59
RUNDC3AQ59EK9 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.71■□□□□ 0.59
RUNDC3AQ59EK9 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.71■□□□□ 0.59
RUNDC3AQ59EK9 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
RUNDC3AQ59EK9 AC100791.3-201ENST00000617619 330 ntBASIC18.71■□□□□ 0.59
RUNDC3AQ59EK9 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RUNDC3AQ59EK9 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
RUNDC3AQ59EK9 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RUNDC3AQ59EK9 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
RUNDC3AQ59EK9 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RUNDC3AQ59EK9 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
RUNDC3AQ59EK9 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RUNDC3AQ59EK9 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RUNDC3AQ59EK9 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
RUNDC3AQ59EK9 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RUNDC3AQ59EK9 AL032819.2-201ENST00000624543 2162 ntBASIC18.71■□□□□ 0.59
RUNDC3AQ59EK9 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
RUNDC3AQ59EK9 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
RUNDC3AQ59EK9 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.71■□□□□ 0.58
RUNDC3AQ59EK9 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
RUNDC3AQ59EK9 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RUNDC3AQ59EK9 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.7■□□□□ 0.58
RUNDC3AQ59EK9 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.7■□□□□ 0.58
RUNDC3AQ59EK9 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RUNDC3AQ59EK9 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.7■□□□□ 0.58
RUNDC3AQ59EK9 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RUNDC3AQ59EK9 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RUNDC3AQ59EK9 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RUNDC3AQ59EK9 ZNRF2P3-201ENST00000424200 374 ntBASIC18.7■□□□□ 0.58
RUNDC3AQ59EK9 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RUNDC3AQ59EK9 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.7■□□□□ 0.58
RUNDC3AQ59EK9 AC013268.1-206ENST00000638368 961 ntBASIC18.7■□□□□ 0.58
RUNDC3AQ59EK9 AC112229.1-201ENST00000639295 961 ntBASIC18.7■□□□□ 0.58
RUNDC3AQ59EK9 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
RUNDC3AQ59EK9 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.7■□□□□ 0.58
RUNDC3AQ59EK9 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RUNDC3AQ59EK9 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RUNDC3AQ59EK9 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.7■□□□□ 0.58
RUNDC3AQ59EK9 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
RUNDC3AQ59EK9 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.7■□□□□ 0.58
RUNDC3AQ59EK9 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RUNDC3AQ59EK9 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RUNDC3AQ59EK9 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RUNDC3AQ59EK9 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RUNDC3AQ59EK9 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RUNDC3AQ59EK9 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RUNDC3AQ59EK9 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RUNDC3AQ59EK9 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RUNDC3AQ59EK9 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RUNDC3AQ59EK9 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RUNDC3AQ59EK9 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RUNDC3AQ59EK9 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RUNDC3AQ59EK9 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms