Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDH1Q08174 AC007952.6-201ENST00000573168 2673 ntBASIC19.15■□□□□ 0.66
PCDH1Q08174 AC003957.1-201ENST00000625108 2673 ntBASIC19.15■□□□□ 0.66
PCDH1Q08174 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
PCDH1Q08174 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.14■□□□□ 0.66
PCDH1Q08174 PHGDH-210ENST00000641115 1638 ntBASIC19.14■□□□□ 0.66
PCDH1Q08174 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PCDH1Q08174 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PCDH1Q08174 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
PCDH1Q08174 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDH1Q08174 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.14■□□□□ 0.65
PCDH1Q08174 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.14■□□□□ 0.65
PCDH1Q08174 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PCDH1Q08174 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.14■□□□□ 0.65
PCDH1Q08174 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.14■□□□□ 0.65
PCDH1Q08174 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.14■□□□□ 0.65
PCDH1Q08174 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
PCDH1Q08174 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDH1Q08174 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.14■□□□□ 0.65
PCDH1Q08174 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDH1Q08174 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH1Q08174 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH1Q08174 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.13■□□□□ 0.65
PCDH1Q08174 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH1Q08174 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.13■□□□□ 0.65
PCDH1Q08174 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDH1Q08174 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
PCDH1Q08174 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDH1Q08174 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.13■□□□□ 0.65
PCDH1Q08174 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.13■□□□□ 0.65
PCDH1Q08174 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.13■□□□□ 0.65
PCDH1Q08174 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDH1Q08174 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.13■□□□□ 0.65
PCDH1Q08174 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
PCDH1Q08174 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH1Q08174 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.13■□□□□ 0.65
PCDH1Q08174 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH1Q08174 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.13■□□□□ 0.65
PCDH1Q08174 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH1Q08174 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.13■□□□□ 0.65
PCDH1Q08174 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH1Q08174 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
PCDH1Q08174 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH1Q08174 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
PCDH1Q08174 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH1Q08174 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH1Q08174 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDH1Q08174 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PCDH1Q08174 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH1Q08174 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH1Q08174 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.12■□□□□ 0.65
PCDH1Q08174 TREX1-205ENST00000625293 1783 ntBASIC19.12■□□□□ 0.65
PCDH1Q08174 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.12■□□□□ 0.65
PCDH1Q08174 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.12■□□□□ 0.65
PCDH1Q08174 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDH1Q08174 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH1Q08174 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PCDH1Q08174 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDH1Q08174 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH1Q08174 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.12■□□□□ 0.65
PCDH1Q08174 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH1Q08174 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH1Q08174 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH1Q08174 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDH1Q08174 AC142086.2-201ENST00000569753 217 ntBASIC19.12■□□□□ 0.65
PCDH1Q08174 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDH1Q08174 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.12■□□□□ 0.65
PCDH1Q08174 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.12■□□□□ 0.65
PCDH1Q08174 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH1Q08174 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH1Q08174 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH1Q08174 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.12■□□□□ 0.65
PCDH1Q08174 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.12■□□□□ 0.65
PCDH1Q08174 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH1Q08174 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH1Q08174 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH1Q08174 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH1Q08174 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH1Q08174 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PCDH1Q08174 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH1Q08174 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH1Q08174 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH1Q08174 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH1Q08174 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PCDH1Q08174 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH1Q08174 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDH1Q08174 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.11■□□□□ 0.65
PCDH1Q08174 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PCDH1Q08174 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH1Q08174 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH1Q08174 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
PCDH1Q08174 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.11■□□□□ 0.65
PCDH1Q08174 HLA-B-256ENST00000639848 1089 ntBASIC19.11■□□□□ 0.65
PCDH1Q08174 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
PCDH1Q08174 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.11■□□□□ 0.65
PCDH1Q08174 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDH1Q08174 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH1Q08174 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDH1Q08174 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH1Q08174 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms