Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.59■□□□□ 0.09
RAB5BP61020 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RAB5BP61020 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC15.59■□□□□ 0.09
RAB5BP61020 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC15.59■□□□□ 0.09
RAB5BP61020 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC15.59■□□□□ 0.09
RAB5BP61020 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC15.59■□□□□ 0.09
RAB5BP61020 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.59■□□□□ 0.09
RAB5BP61020 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RAB5BP61020 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB5BP61020 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
RAB5BP61020 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC15.59■□□□□ 0.09
RAB5BP61020 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB5BP61020 AL391005.1-201ENST00000623953 2435 ntBASIC15.59■□□□□ 0.09
RAB5BP61020 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB5BP61020 AC090164.3-201ENST00000610780 2143 ntBASIC15.59■□□□□ 0.09
RAB5BP61020 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB5BP61020 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB5BP61020 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB5BP61020 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB5BP61020 AL354751.1-201ENST00000412768 1863 ntBASIC15.59■□□□□ 0.09
RAB5BP61020 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC15.59■□□□□ 0.09
RAB5BP61020 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB5BP61020 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
RAB5BP61020 CROCCP3-202ENST00000420820 1947 ntBASIC15.58■□□□□ 0.09
RAB5BP61020 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
RAB5BP61020 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC15.58■□□□□ 0.09
RAB5BP61020 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.58■□□□□ 0.09
RAB5BP61020 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
RAB5BP61020 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
RAB5BP61020 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
RAB5BP61020 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.58■□□□□ 0.09
RAB5BP61020 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
RAB5BP61020 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.58■□□□□ 0.09
RAB5BP61020 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC15.58■□□□□ 0.08
RAB5BP61020 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC15.58■□□□□ 0.08
RAB5BP61020 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
RAB5BP61020 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB5BP61020 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RAB5BP61020 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC15.58■□□□□ 0.08
RAB5BP61020 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB5BP61020 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RAB5BP61020 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RAB5BP61020 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB5BP61020 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
RAB5BP61020 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB5BP61020 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB5BP61020 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB5BP61020 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
RAB5BP61020 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB5BP61020 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC15.58■□□□□ 0.08
RAB5BP61020 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RAB5BP61020 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB5BP61020 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB5BP61020 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB5BP61020 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RAB5BP61020 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB5BP61020 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB5BP61020 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.57■□□□□ 0.08
RAB5BP61020 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
RAB5BP61020 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB5BP61020 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB5BP61020 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC15.57■□□□□ 0.08
RAB5BP61020 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RAB5BP61020 AC060814.1-201ENST00000554326 538 ntBASIC15.57■□□□□ 0.08
RAB5BP61020 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB5BP61020 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
RAB5BP61020 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB5BP61020 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.57■□□□□ 0.08
RAB5BP61020 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
RAB5BP61020 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC15.57■□□□□ 0.08
RAB5BP61020 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
RAB5BP61020 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RAB5BP61020 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB5BP61020 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB5BP61020 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC15.57■□□□□ 0.08
RAB5BP61020 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB5BP61020 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC15.56■□□□□ 0.08
RAB5BP61020 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
RAB5BP61020 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC15.56■□□□□ 0.08
RAB5BP61020 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RAB5BP61020 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.56■□□□□ 0.08
RAB5BP61020 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RAB5BP61020 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB5BP61020 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB5BP61020 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC15.56■□□□□ 0.08
RAB5BP61020 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC15.56■□□□□ 0.08
RAB5BP61020 ECEL1P2-201ENST00000461596 1295 ntBASIC15.56■□□□□ 0.08
RAB5BP61020 GFER-205ENST00000569451 517 ntTSL 5 BASIC15.56■□□□□ 0.08
RAB5BP61020 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
RAB5BP61020 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB5BP61020 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RAB5BP61020 STK25-205ENST00000405883 1904 ntTSL 2 BASIC15.56■□□□□ 0.08
RAB5BP61020 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
RAB5BP61020 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB5BP61020 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB5BP61020 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RAB5BP61020 AC084018.2-201ENST00000613093 2607 ntBASIC15.56■□□□□ 0.08
RAB5BP61020 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RAB5BP61020 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
RAB5BP61020 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms