Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
EIF3EP60228 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.48■□□□□ 0.87
EIF3EP60228 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
EIF3EP60228 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.48■□□□□ 0.87
EIF3EP60228 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
EIF3EP60228 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
EIF3EP60228 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.47■□□□□ 0.87
EIF3EP60228 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
EIF3EP60228 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
EIF3EP60228 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
EIF3EP60228 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
EIF3EP60228 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.47■□□□□ 0.87
EIF3EP60228 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
EIF3EP60228 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
EIF3EP60228 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.47■□□□□ 0.87
EIF3EP60228 LSM12P1-201ENST00000411836 588 ntBASIC20.47■□□□□ 0.87
EIF3EP60228 AC023632.3-201ENST00000521633 145 ntBASIC20.47■□□□□ 0.87
EIF3EP60228 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.47■□□□□ 0.87
EIF3EP60228 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.47■□□□□ 0.87
EIF3EP60228 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.47■□□□□ 0.87
EIF3EP60228 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
EIF3EP60228 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
EIF3EP60228 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.47■□□□□ 0.87
EIF3EP60228 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
EIF3EP60228 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.47■□□□□ 0.87
EIF3EP60228 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
EIF3EP60228 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
EIF3EP60228 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
EIF3EP60228 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EIF3EP60228 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EIF3EP60228 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
EIF3EP60228 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
EIF3EP60228 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
EIF3EP60228 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EIF3EP60228 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.46■□□□□ 0.87
EIF3EP60228 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.46■□□□□ 0.87
EIF3EP60228 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.46■□□□□ 0.87
EIF3EP60228 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EIF3EP60228 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
EIF3EP60228 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
EIF3EP60228 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.46■□□□□ 0.87
EIF3EP60228 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.46■□□□□ 0.87
EIF3EP60228 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
EIF3EP60228 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EIF3EP60228 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.46■□□□□ 0.87
EIF3EP60228 CDCA4P2-201ENST00000441182 718 ntBASIC20.46■□□□□ 0.87
EIF3EP60228 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
EIF3EP60228 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
EIF3EP60228 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EIF3EP60228 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.46■□□□□ 0.87
EIF3EP60228 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EIF3EP60228 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
EIF3EP60228 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.45■□□□□ 0.86
EIF3EP60228 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
EIF3EP60228 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
EIF3EP60228 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
EIF3EP60228 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.45■□□□□ 0.86
EIF3EP60228 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.45■□□□□ 0.86
EIF3EP60228 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.45■□□□□ 0.86
EIF3EP60228 AL050303.2-201ENST00000619798 666 ntBASIC20.45■□□□□ 0.86
EIF3EP60228 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
EIF3EP60228 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
EIF3EP60228 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.45■□□□□ 0.86
EIF3EP60228 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.45■□□□□ 0.86
EIF3EP60228 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
EIF3EP60228 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
EIF3EP60228 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.45■□□□□ 0.86
EIF3EP60228 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.45■□□□□ 0.86
EIF3EP60228 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
EIF3EP60228 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
EIF3EP60228 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
EIF3EP60228 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
EIF3EP60228 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
EIF3EP60228 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.44■□□□□ 0.86
EIF3EP60228 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
EIF3EP60228 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
EIF3EP60228 AP001271.2-201ENST00000624018 1556 ntBASIC20.44■□□□□ 0.86
EIF3EP60228 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
EIF3EP60228 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.44■□□□□ 0.86
EIF3EP60228 AC105036.2-201ENST00000569468 176 ntBASIC20.44■□□□□ 0.86
EIF3EP60228 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.44■□□□□ 0.86
EIF3EP60228 AL137784.2-201ENST00000607332 1000 ntBASIC20.44■□□□□ 0.86
EIF3EP60228 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
EIF3EP60228 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.44■□□□□ 0.86
EIF3EP60228 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
EIF3EP60228 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.44■□□□□ 0.86
EIF3EP60228 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
EIF3EP60228 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
EIF3EP60228 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
EIF3EP60228 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
EIF3EP60228 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
EIF3EP60228 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
EIF3EP60228 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
EIF3EP60228 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
EIF3EP60228 MKRN4P-201ENST00000444706 1521 ntBASIC20.43■□□□□ 0.86
EIF3EP60228 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
EIF3EP60228 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.43■□□□□ 0.86
EIF3EP60228 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
EIF3EP60228 MIR935-201ENST00000401179 91 ntBASIC20.43■□□□□ 0.86
EIF3EP60228 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms