Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
WNT3AP56704 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
WNT3AP56704 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
WNT3AP56704 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.07■□□□□ 0.8
WNT3AP56704 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
WNT3AP56704 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
WNT3AP56704 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.06■□□□□ 0.8
WNT3AP56704 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
WNT3AP56704 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
WNT3AP56704 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
WNT3AP56704 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
WNT3AP56704 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
WNT3AP56704 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
WNT3AP56704 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
WNT3AP56704 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
WNT3AP56704 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.06■□□□□ 0.8
WNT3AP56704 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
WNT3AP56704 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.06■□□□□ 0.8
WNT3AP56704 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
WNT3AP56704 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.06■□□□□ 0.8
WNT3AP56704 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.06■□□□□ 0.8
WNT3AP56704 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.06■□□□□ 0.8
WNT3AP56704 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.06■□□□□ 0.8
WNT3AP56704 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.06■□□□□ 0.8
WNT3AP56704 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
WNT3AP56704 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.06■□□□□ 0.8
WNT3AP56704 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
WNT3AP56704 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
WNT3AP56704 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.06■□□□□ 0.8
WNT3AP56704 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
WNT3AP56704 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
WNT3AP56704 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
WNT3AP56704 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.05■□□□□ 0.8
WNT3AP56704 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
WNT3AP56704 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
WNT3AP56704 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.05■□□□□ 0.8
WNT3AP56704 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
WNT3AP56704 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
WNT3AP56704 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
WNT3AP56704 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
WNT3AP56704 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.05■□□□□ 0.8
WNT3AP56704 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.05■□□□□ 0.8
WNT3AP56704 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.05■□□□□ 0.8
WNT3AP56704 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.05■□□□□ 0.8
WNT3AP56704 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.05■□□□□ 0.8
WNT3AP56704 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
WNT3AP56704 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
WNT3AP56704 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
WNT3AP56704 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
WNT3AP56704 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.05■□□□□ 0.8
WNT3AP56704 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
WNT3AP56704 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
WNT3AP56704 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
WNT3AP56704 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
WNT3AP56704 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
WNT3AP56704 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
WNT3AP56704 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
WNT3AP56704 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
WNT3AP56704 AP001271.2-201ENST00000624018 1556 ntBASIC20.04■□□□□ 0.8
WNT3AP56704 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.04■□□□□ 0.8
WNT3AP56704 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
WNT3AP56704 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
WNT3AP56704 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
WNT3AP56704 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
WNT3AP56704 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
WNT3AP56704 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.04■□□□□ 0.8
WNT3AP56704 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.04■□□□□ 0.8
WNT3AP56704 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.04■□□□□ 0.8
WNT3AP56704 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
WNT3AP56704 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
WNT3AP56704 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.04■□□□□ 0.8
WNT3AP56704 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.04■□□□□ 0.8
WNT3AP56704 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
WNT3AP56704 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
WNT3AP56704 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
WNT3AP56704 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
WNT3AP56704 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.04■□□□□ 0.8
WNT3AP56704 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
WNT3AP56704 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
WNT3AP56704 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
WNT3AP56704 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
WNT3AP56704 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
WNT3AP56704 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.03■□□□□ 0.8
WNT3AP56704 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
WNT3AP56704 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.03■□□□□ 0.8
WNT3AP56704 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
WNT3AP56704 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
WNT3AP56704 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
WNT3AP56704 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.03■□□□□ 0.8
WNT3AP56704 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
WNT3AP56704 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
WNT3AP56704 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
WNT3AP56704 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
WNT3AP56704 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.03■□□□□ 0.8
WNT3AP56704 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.02■□□□□ 0.8
WNT3AP56704 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
WNT3AP56704 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.02■□□□□ 0.8
WNT3AP56704 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.02■□□□□ 0.8
WNT3AP56704 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
WNT3AP56704 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms