Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATXN1P54253 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATXN1P54253 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
ATXN1P54253 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.86■□□□□ 0.93
ATXN1P54253 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATXN1P54253 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.86■□□□□ 0.93
ATXN1P54253 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATXN1P54253 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATXN1P54253 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATXN1P54253 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATXN1P54253 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATXN1P54253 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATXN1P54253 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATXN1P54253 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
ATXN1P54253 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATXN1P54253 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATXN1P54253 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
ATXN1P54253 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATXN1P54253 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.85■□□□□ 0.93
ATXN1P54253 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATXN1P54253 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.85■□□□□ 0.93
ATXN1P54253 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.85■□□□□ 0.93
ATXN1P54253 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.85■□□□□ 0.93
ATXN1P54253 AC008403.3-201ENST00000598924 454 ntBASIC20.85■□□□□ 0.93
ATXN1P54253 AL031963.3-201ENST00000606441 850 ntBASIC20.85■□□□□ 0.93
ATXN1P54253 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.85■□□□□ 0.93
ATXN1P54253 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ATXN1P54253 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.85■□□□□ 0.93
ATXN1P54253 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ATXN1P54253 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ATXN1P54253 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.84■□□□□ 0.93
ATXN1P54253 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
ATXN1P54253 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.84■□□□□ 0.93
ATXN1P54253 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATXN1P54253 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATXN1P54253 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATXN1P54253 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.84■□□□□ 0.93
ATXN1P54253 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATXN1P54253 AC006557.6-201ENST00000623071 864 ntBASIC20.84■□□□□ 0.93
ATXN1P54253 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.84■□□□□ 0.93
ATXN1P54253 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.84■□□□□ 0.93
ATXN1P54253 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATXN1P54253 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATXN1P54253 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.84■□□□□ 0.93
ATXN1P54253 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATXN1P54253 TCF3P1-201ENST00000423021 1937 ntBASIC20.84■□□□□ 0.93
ATXN1P54253 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ATXN1P54253 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.83■□□□□ 0.93
ATXN1P54253 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATXN1P54253 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATXN1P54253 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATXN1P54253 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATXN1P54253 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ATXN1P54253 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATXN1P54253 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.83■□□□□ 0.93
ATXN1P54253 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.83■□□□□ 0.93
ATXN1P54253 AC133561.5-201ENST00000635547 218 ntBASIC20.83■□□□□ 0.93
ATXN1P54253 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATXN1P54253 KRT8P20-201ENST00000423953 1409 ntBASIC20.83■□□□□ 0.93
ATXN1P54253 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.83■□□□□ 0.92
ATXN1P54253 AC092368.3-202ENST00000574180 1591 ntBASIC20.83■□□□□ 0.92
ATXN1P54253 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.92
ATXN1P54253 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.83■□□□□ 0.92
ATXN1P54253 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
ATXN1P54253 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ATXN1P54253 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ATXN1P54253 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
ATXN1P54253 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
ATXN1P54253 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
ATXN1P54253 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.82■□□□□ 0.92
ATXN1P54253 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATXN1P54253 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.82■□□□□ 0.92
ATXN1P54253 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ATXN1P54253 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.82■□□□□ 0.92
ATXN1P54253 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.82■□□□□ 0.92
ATXN1P54253 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATXN1P54253 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ATXN1P54253 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ATXN1P54253 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.82■□□□□ 0.92
ATXN1P54253 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATXN1P54253 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.82■□□□□ 0.92
ATXN1P54253 AC023632.3-201ENST00000521633 145 ntBASIC20.82■□□□□ 0.92
ATXN1P54253 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.82■□□□□ 0.92
ATXN1P54253 HLA-B-256ENST00000639848 1089 ntBASIC20.82■□□□□ 0.92
ATXN1P54253 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ATXN1P54253 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATXN1P54253 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATXN1P54253 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATXN1P54253 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
ATXN1P54253 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATXN1P54253 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.81■□□□□ 0.92
ATXN1P54253 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATXN1P54253 AFG3L1P-217ENST00000557444 2447 ntBASIC20.81■□□□□ 0.92
ATXN1P54253 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATXN1P54253 RCN1P1-201ENST00000400413 996 ntBASIC20.81■□□□□ 0.92
ATXN1P54253 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATXN1P54253 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATXN1P54253 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATXN1P54253 PNMA6B-201ENST00000538162 1200 ntBASIC20.81■□□□□ 0.92
ATXN1P54253 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms