Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CCR9P51686 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC17.45■□□□□ 0.38
CCR9P51686 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCR9P51686 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.45■□□□□ 0.38
CCR9P51686 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCR9P51686 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.45■□□□□ 0.38
CCR9P51686 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.45■□□□□ 0.38
CCR9P51686 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC17.45■□□□□ 0.38
CCR9P51686 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC17.45■□□□□ 0.38
CCR9P51686 PTBP1P-201ENST00000554374 1601 ntBASIC17.45■□□□□ 0.38
CCR9P51686 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCR9P51686 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.45■□□□□ 0.38
CCR9P51686 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.45■□□□□ 0.38
CCR9P51686 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCR9P51686 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCR9P51686 KRT8P17-201ENST00000453110 1448 ntBASIC17.45■□□□□ 0.38
CCR9P51686 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCR9P51686 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.45■□□□□ 0.38
CCR9P51686 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
CCR9P51686 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CCR9P51686 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCR9P51686 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCR9P51686 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCR9P51686 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CCR9P51686 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCR9P51686 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCR9P51686 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCR9P51686 AC010536.3-201ENST00000620306 533 ntBASIC17.44■□□□□ 0.38
CCR9P51686 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CCR9P51686 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CCR9P51686 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.44■□□□□ 0.38
CCR9P51686 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCR9P51686 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.44■□□□□ 0.38
CCR9P51686 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.44■□□□□ 0.38
CCR9P51686 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.44■□□□□ 0.38
CCR9P51686 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.44■□□□□ 0.38
CCR9P51686 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.44■□□□□ 0.38
CCR9P51686 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCR9P51686 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCR9P51686 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCR9P51686 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCR9P51686 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.43■□□□□ 0.38
CCR9P51686 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCR9P51686 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCR9P51686 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCR9P51686 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCR9P51686 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCR9P51686 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCR9P51686 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCR9P51686 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.43■□□□□ 0.38
CCR9P51686 AC007322.4-201ENST00000509611 723 ntBASIC17.43■□□□□ 0.38
CCR9P51686 KRT18P61-201ENST00000585825 1298 ntBASIC17.43■□□□□ 0.38
CCR9P51686 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCR9P51686 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCR9P51686 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCR9P51686 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCR9P51686 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CCR9P51686 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCR9P51686 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCR9P51686 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCR9P51686 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.43■□□□□ 0.38
CCR9P51686 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.43■□□□□ 0.38
CCR9P51686 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.43■□□□□ 0.38
CCR9P51686 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCR9P51686 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.43■□□□□ 0.38
CCR9P51686 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCR9P51686 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.42■□□□□ 0.38
CCR9P51686 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCR9P51686 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCR9P51686 Z82202.1-201ENST00000623446 1880 ntBASIC17.42■□□□□ 0.38
CCR9P51686 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCR9P51686 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCR9P51686 KRT16P6-202ENST00000425692 1426 ntBASIC17.42■□□□□ 0.38
CCR9P51686 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCR9P51686 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCR9P51686 AC026471.1-201ENST00000564629 3026 ntBASIC17.42■□□□□ 0.38
CCR9P51686 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCR9P51686 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCR9P51686 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCR9P51686 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.42■□□□□ 0.38
CCR9P51686 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC17.42■□□□□ 0.38
CCR9P51686 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC17.42■□□□□ 0.38
CCR9P51686 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.42■□□□□ 0.38
CCR9P51686 AC100791.3-201ENST00000617619 330 ntBASIC17.42■□□□□ 0.38
CCR9P51686 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCR9P51686 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCR9P51686 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCR9P51686 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CCR9P51686 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCR9P51686 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCR9P51686 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCR9P51686 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCR9P51686 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCR9P51686 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.42■□□□□ 0.38
CCR9P51686 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
CCR9P51686 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.41■□□□□ 0.38
CCR9P51686 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
CCR9P51686 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCR9P51686 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCR9P51686 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms