Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLK3P49761 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLK3P49761 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLK3P49761 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CLK3P49761 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLK3P49761 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLK3P49761 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.76■□□□□ 0.59
CLK3P49761 AC105036.2-201ENST00000569468 176 ntBASIC18.76■□□□□ 0.59
CLK3P49761 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLK3P49761 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLK3P49761 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLK3P49761 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLK3P49761 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLK3P49761 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLK3P49761 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLK3P49761 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLK3P49761 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLK3P49761 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLK3P49761 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLK3P49761 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLK3P49761 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.75■□□□□ 0.59
CLK3P49761 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CLK3P49761 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLK3P49761 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLK3P49761 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLK3P49761 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CLK3P49761 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.75■□□□□ 0.59
CLK3P49761 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLK3P49761 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CLK3P49761 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLK3P49761 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CLK3P49761 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CLK3P49761 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.75■□□□□ 0.59
CLK3P49761 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.75■□□□□ 0.59
CLK3P49761 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CLK3P49761 CROCCP5-201ENST00000436658 830 ntBASIC18.75■□□□□ 0.59
CLK3P49761 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.75■□□□□ 0.59
CLK3P49761 AC090192.1-201ENST00000517740 490 ntBASIC18.75■□□□□ 0.59
CLK3P49761 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLK3P49761 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLK3P49761 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.75■□□□□ 0.59
CLK3P49761 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLK3P49761 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLK3P49761 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLK3P49761 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLK3P49761 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLK3P49761 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLK3P49761 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLK3P49761 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLK3P49761 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.74■□□□□ 0.59
CLK3P49761 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLK3P49761 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLK3P49761 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
CLK3P49761 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.74■□□□□ 0.59
CLK3P49761 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLK3P49761 CYP21A1P-202ENST00000354927 1481 ntBASIC18.74■□□□□ 0.59
CLK3P49761 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.74■□□□□ 0.59
CLK3P49761 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.74■□□□□ 0.59
CLK3P49761 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
CLK3P49761 MIR2861-201ENST00000636310 90 ntBASIC18.74■□□□□ 0.59
CLK3P49761 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLK3P49761 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLK3P49761 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLK3P49761 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLK3P49761 AP000974.1-201ENST00000623909 2387 ntBASIC18.74■□□□□ 0.59
CLK3P49761 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CLK3P49761 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.74■□□□□ 0.59
CLK3P49761 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLK3P49761 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.73■□□□□ 0.59
CLK3P49761 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLK3P49761 GPX1P1-201ENST00000388829 606 ntBASIC18.73■□□□□ 0.59
CLK3P49761 SLC29A4P1-201ENST00000398760 971 ntBASIC18.73■□□□□ 0.59
CLK3P49761 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.73■□□□□ 0.59
CLK3P49761 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.73■□□□□ 0.59
CLK3P49761 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.73■□□□□ 0.59
CLK3P49761 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.73■□□□□ 0.59
CLK3P49761 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.73■□□□□ 0.59
CLK3P49761 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.73■□□□□ 0.59
CLK3P49761 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.73■□□□□ 0.59
CLK3P49761 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
CLK3P49761 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CLK3P49761 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLK3P49761 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLK3P49761 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLK3P49761 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.73■□□□□ 0.59
CLK3P49761 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.73■□□□□ 0.59
CLK3P49761 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.73■□□□□ 0.59
CLK3P49761 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLK3P49761 MKRN4P-201ENST00000444706 1521 ntBASIC18.73■□□□□ 0.59
CLK3P49761 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLK3P49761 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CLK3P49761 AC087633.2-202ENST00000565166 1439 ntBASIC18.73■□□□□ 0.59
CLK3P49761 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.73■□□□□ 0.59
CLK3P49761 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.73■□□□□ 0.59
CLK3P49761 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLK3P49761 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLK3P49761 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CLK3P49761 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLK3P49761 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.72■□□□□ 0.59
CLK3P49761 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms