Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CENPAP49450 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CENPAP49450 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.94■□□□□ 0.46
CENPAP49450 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.94■□□□□ 0.46
CENPAP49450 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.94■□□□□ 0.46
CENPAP49450 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CENPAP49450 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CENPAP49450 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.94■□□□□ 0.46
CENPAP49450 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CENPAP49450 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.94■□□□□ 0.46
CENPAP49450 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CENPAP49450 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CENPAP49450 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.94■□□□□ 0.46
CENPAP49450 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC17.94■□□□□ 0.46
CENPAP49450 AC013268.1-206ENST00000638368 961 ntBASIC17.94■□□□□ 0.46
CENPAP49450 AC112229.1-201ENST00000639295 961 ntBASIC17.94■□□□□ 0.46
CENPAP49450 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CENPAP49450 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
CENPAP49450 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
CENPAP49450 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.94■□□□□ 0.46
CENPAP49450 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CENPAP49450 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.94■□□□□ 0.46
CENPAP49450 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CENPAP49450 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CENPAP49450 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CENPAP49450 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CENPAP49450 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CENPAP49450 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CENPAP49450 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
CENPAP49450 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.93■□□□□ 0.46
CENPAP49450 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CENPAP49450 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CENPAP49450 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CENPAP49450 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CENPAP49450 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CENPAP49450 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CENPAP49450 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.93■□□□□ 0.46
CENPAP49450 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.93■□□□□ 0.46
CENPAP49450 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CENPAP49450 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.93■□□□□ 0.46
CENPAP49450 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CENPAP49450 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.93■□□□□ 0.46
CENPAP49450 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CENPAP49450 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CENPAP49450 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CENPAP49450 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.93■□□□□ 0.46
CENPAP49450 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CENPAP49450 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.93■□□□□ 0.46
CENPAP49450 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CENPAP49450 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CENPAP49450 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CENPAP49450 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.93■□□□□ 0.46
CENPAP49450 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CENPAP49450 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.93■□□□□ 0.46
CENPAP49450 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CENPAP49450 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CENPAP49450 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CENPAP49450 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.92■□□□□ 0.46
CENPAP49450 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CENPAP49450 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CENPAP49450 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.92■□□□□ 0.46
CENPAP49450 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CENPAP49450 AC087633.2-202ENST00000565166 1439 ntBASIC17.92■□□□□ 0.46
CENPAP49450 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.92■□□□□ 0.46
CENPAP49450 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
CENPAP49450 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CENPAP49450 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CENPAP49450 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CENPAP49450 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
CENPAP49450 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.92■□□□□ 0.46
CENPAP49450 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.92■□□□□ 0.46
CENPAP49450 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.92■□□□□ 0.46
CENPAP49450 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CENPAP49450 AC016405.3-201ENST00000607710 860 ntBASIC17.92■□□□□ 0.46
CENPAP49450 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CENPAP49450 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CENPAP49450 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CENPAP49450 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CENPAP49450 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CENPAP49450 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.92■□□□□ 0.46
CENPAP49450 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CENPAP49450 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
CENPAP49450 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CENPAP49450 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.91■□□□□ 0.46
CENPAP49450 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.91■□□□□ 0.46
CENPAP49450 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CENPAP49450 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
CENPAP49450 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.91■□□□□ 0.46
CENPAP49450 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CENPAP49450 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CENPAP49450 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.91■□□□□ 0.46
CENPAP49450 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CENPAP49450 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.91■□□□□ 0.46
CENPAP49450 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CENPAP49450 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
CENPAP49450 RARRES2P6-201ENST00000567333 442 ntBASIC17.91■□□□□ 0.46
CENPAP49450 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.91■□□□□ 0.46
CENPAP49450 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CENPAP49450 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CENPAP49450 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms