Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
MMP13P45452 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MMP13P45452 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MMP13P45452 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MMP13P45452 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.63■□□□□ 0.89
MMP13P45452 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MMP13P45452 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.63■□□□□ 0.89
MMP13P45452 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
MMP13P45452 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
MMP13P45452 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
MMP13P45452 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
MMP13P45452 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.62■□□□□ 0.89
MMP13P45452 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
MMP13P45452 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MMP13P45452 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MMP13P45452 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.62■□□□□ 0.89
MMP13P45452 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
MMP13P45452 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MMP13P45452 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MMP13P45452 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
MMP13P45452 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MMP13P45452 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.62■□□□□ 0.89
MMP13P45452 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.62■□□□□ 0.89
MMP13P45452 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.62■□□□□ 0.89
MMP13P45452 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.62■□□□□ 0.89
MMP13P45452 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
MMP13P45452 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MMP13P45452 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.62■□□□□ 0.89
MMP13P45452 AC004408.2-201ENST00000623613 2777 ntBASIC20.62■□□□□ 0.89
MMP13P45452 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MMP13P45452 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
MMP13P45452 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.61■□□□□ 0.89
MMP13P45452 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
MMP13P45452 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.61■□□□□ 0.89
MMP13P45452 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MMP13P45452 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
MMP13P45452 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MMP13P45452 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
MMP13P45452 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
MMP13P45452 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.61■□□□□ 0.89
MMP13P45452 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MMP13P45452 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
MMP13P45452 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.61■□□□□ 0.89
MMP13P45452 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
MMP13P45452 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MMP13P45452 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MMP13P45452 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
MMP13P45452 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.61■□□□□ 0.89
MMP13P45452 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
MMP13P45452 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.61■□□□□ 0.89
MMP13P45452 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
MMP13P45452 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MMP13P45452 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
MMP13P45452 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MMP13P45452 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.6■□□□□ 0.89
MMP13P45452 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
MMP13P45452 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
MMP13P45452 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MMP13P45452 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MMP13P45452 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.6■□□□□ 0.89
MMP13P45452 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.6■□□□□ 0.89
MMP13P45452 HLA-L-209ENST00000420110 1011 ntBASIC20.6■□□□□ 0.89
MMP13P45452 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.6■□□□□ 0.89
MMP13P45452 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.6■□□□□ 0.89
MMP13P45452 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.6■□□□□ 0.89
MMP13P45452 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.6■□□□□ 0.89
MMP13P45452 AC092118.2-201ENST00000613495 667 ntBASIC20.6■□□□□ 0.89
MMP13P45452 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.6■□□□□ 0.89
MMP13P45452 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MMP13P45452 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
MMP13P45452 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MMP13P45452 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
MMP13P45452 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.6■□□□□ 0.89
MMP13P45452 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.6■□□□□ 0.89
MMP13P45452 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.6■□□□□ 0.89
MMP13P45452 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
MMP13P45452 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
MMP13P45452 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
MMP13P45452 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MMP13P45452 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
MMP13P45452 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
MMP13P45452 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
MMP13P45452 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MMP13P45452 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MMP13P45452 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MMP13P45452 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MMP13P45452 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
MMP13P45452 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MMP13P45452 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MMP13P45452 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MMP13P45452 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
MMP13P45452 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MMP13P45452 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.58■□□□□ 0.89
MMP13P45452 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MMP13P45452 AC005332.7-201ENST00000614046 2005 ntBASIC20.58■□□□□ 0.89
MMP13P45452 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MMP13P45452 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.58■□□□□ 0.89
MMP13P45452 ID1-201ENST00000376105 1233 ntBASIC20.58■□□□□ 0.89
MMP13P45452 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.58■□□□□ 0.89
MMP13P45452 AL138781.1-201ENST00000566567 1274 ntBASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms