Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
KRT9P35527 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
KRT9P35527 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
KRT9P35527 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
KRT9P35527 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.68■■□□□ 1.06
KRT9P35527 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.68■■□□□ 1.06
KRT9P35527 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
KRT9P35527 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
KRT9P35527 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.67■■□□□ 1.06
KRT9P35527 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
KRT9P35527 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KRT9P35527 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.67■■□□□ 1.06
KRT9P35527 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.67■■□□□ 1.06
KRT9P35527 AC080038.1-201ENST00000611274 1154 ntBASIC21.67■■□□□ 1.06
KRT9P35527 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.67■■□□□ 1.06
KRT9P35527 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.67■■□□□ 1.06
KRT9P35527 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC21.67■■□□□ 1.06
KRT9P35527 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
KRT9P35527 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KRT9P35527 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KRT9P35527 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
KRT9P35527 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KRT9P35527 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KRT9P35527 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC21.66■■□□□ 1.06
KRT9P35527 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
KRT9P35527 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KRT9P35527 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
KRT9P35527 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KRT9P35527 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.66■■□□□ 1.06
KRT9P35527 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
KRT9P35527 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.66■■□□□ 1.06
KRT9P35527 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KRT9P35527 AC069236.1-201ENST00000604339 616 ntBASIC21.66■■□□□ 1.06
KRT9P35527 AC008694.1-202ENST00000636953 945 ntBASIC21.66■■□□□ 1.06
KRT9P35527 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
KRT9P35527 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
KRT9P35527 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
KRT9P35527 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KRT9P35527 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
KRT9P35527 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KRT9P35527 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KRT9P35527 CYP21A1P-202ENST00000354927 1481 ntBASIC21.65■■□□□ 1.06
KRT9P35527 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
KRT9P35527 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KRT9P35527 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KRT9P35527 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KRT9P35527 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KRT9P35527 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
KRT9P35527 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KRT9P35527 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
KRT9P35527 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.65■■□□□ 1.06
KRT9P35527 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.65■■□□□ 1.06
KRT9P35527 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
KRT9P35527 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC21.65■■□□□ 1.06
KRT9P35527 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.65■■□□□ 1.06
KRT9P35527 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
KRT9P35527 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
KRT9P35527 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.65■■□□□ 1.06
KRT9P35527 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.65■■□□□ 1.06
KRT9P35527 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC21.65■■□□□ 1.06
KRT9P35527 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.65■■□□□ 1.06
KRT9P35527 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KRT9P35527 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
KRT9P35527 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
KRT9P35527 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
KRT9P35527 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
KRT9P35527 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC21.64■■□□□ 1.06
KRT9P35527 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.64■■□□□ 1.06
KRT9P35527 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC21.64■■□□□ 1.06
KRT9P35527 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
KRT9P35527 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
KRT9P35527 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
KRT9P35527 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
KRT9P35527 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
KRT9P35527 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
KRT9P35527 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.64■■□□□ 1.05
KRT9P35527 CYP2T1P-201ENST00000432607 1285 ntBASIC21.64■■□□□ 1.05
KRT9P35527 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
KRT9P35527 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.64■■□□□ 1.05
KRT9P35527 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
KRT9P35527 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
KRT9P35527 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
KRT9P35527 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
KRT9P35527 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.64■■□□□ 1.05
KRT9P35527 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
KRT9P35527 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
KRT9P35527 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
KRT9P35527 TNXA-203ENST00000507684 2038 ntBASIC21.63■■□□□ 1.05
KRT9P35527 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
KRT9P35527 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
KRT9P35527 PTBP1P-201ENST00000554374 1601 ntBASIC21.63■■□□□ 1.05
KRT9P35527 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
KRT9P35527 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
KRT9P35527 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
KRT9P35527 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.63■■□□□ 1.05
KRT9P35527 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.63■■□□□ 1.05
KRT9P35527 AC100791.3-201ENST00000617619 330 ntBASIC21.63■■□□□ 1.05
KRT9P35527 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC21.63■■□□□ 1.05
KRT9P35527 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
KRT9P35527 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms